RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ZSWIM4Q9H7M6 989 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 MRPL17Q9NRX2 175 aaKnown RBP18.24■□□□□ 0.51
LIG1-205ENST00000593425 HES2Q9Y543 173 aa18.24■□□□□ 0.51
LIG1-205ENST00000593425 F8W810 466 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 ASAP2O43150 1006 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 PFKFB2O60825 505 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 URODP06132 367 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 ITGA4P13612 1032 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 XBP1P17861 261 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 MLH1P40692 756 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 PTENP60484 403 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 NR5A1Q13285 461 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 CWF19L1Q69YN2 538 aaKnown RBP18.23■□□□□ 0.51
LIG1-205ENST00000593425 RNF168Q8IYW5 571 aaPredicted RBP18.23■□□□□ 0.51
LIG1-205ENST00000593425 CNNM3Q8NE01 707 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 GAD1Q99259 594 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 NAP1L4Q99733 375 aaKnown RBP18.23■□□□□ 0.51
LIG1-205ENST00000593425 MAN1C1Q9NR34 630 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 MIOSQ9NXC5 875 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 STK39Q9UEW8 545 aa18.23■□□□□ 0.51
LIG1-205ENST00000593425 ARL5CA6NH57 179 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 INPPL1O15357 1258 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 SLITRK3O94933 977 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 EFEMP2O95967 443 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 OR1G1P47890 313 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 SCNN1GP51170 649 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 AK2P54819 239 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 DSC1Q08554 894 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 ASTLQ6HA08 431 aaPredicted RBP18.22■□□□□ 0.51
LIG1-205ENST00000593425 TPH2Q8IWU9 490 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 ASAP3Q8TDY4 903 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 TNFRSF25Q93038 417 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 ACSF2Q96CM8 615 aaPredicted RBP18.22■□□□□ 0.51
LIG1-205ENST00000593425 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 MFSD1Q9H3U5 465 aa18.22■□□□□ 0.51
LIG1-205ENST00000593425 TEX28O15482 410 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 MYBP10242 640 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 MBTD1Q05BQ5 628 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 CAPSQ13938 189 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 AMHR2Q16671 573 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 NOTUMQ6P988 496 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 C15orf39Q6ZRI6 1047 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 OTOP3Q7RTS5 596 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 IFNLR1Q8IU57 520 aaPredicted RBP18.21■□□□□ 0.51
LIG1-205ENST00000593425 SLFN12Q8IYM2 578 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 ZFP42Q96MM3 310 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
LIG1-205ENST00000593425 APOL6Q9BWW8 343 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 CSRNP2Q9H175 543 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
LIG1-205ENST00000593425 UBN1Q9NPG3 1134 aa18.21■□□□□ 0.51
LIG1-205ENST00000593425 ORC3Q9UBD5 711 aaPredicted RBP18.21■□□□□ 0.51
LIG1-205ENST00000593425 PROB1E7EW31 1015 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 INO80B-WBP1J3KQ70 363 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 WNT7AO00755 349 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
LIG1-205ENST00000593425 BAG4O95429 457 aaKnown RBP18.2■□□□□ 0.5
LIG1-205ENST00000593425 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
LIG1-205ENST00000593425 AXLP30530 894 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 KRT2P35908 639 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 GLUD2P49448 558 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 TDGQ13569 410 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 MXD4Q14582 209 aaPredicted RBP18.2■□□□□ 0.5
LIG1-205ENST00000593425 PCBP1Q15365 356 aaKnown RBP eCLIP18.2■□□□□ 0.5
LIG1-205ENST00000593425 KIAA0319Q5VV43 1072 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
LIG1-205ENST00000593425 FLCNQ8NFG4 579 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 CMASQ8NFW8 434 aaPredicted RBP18.2■□□□□ 0.5
LIG1-205ENST00000593425 CCDC51Q96ER9 411 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 KCNK12Q9HB15 430 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 DUSP12Q9UNI6 340 aa18.2■□□□□ 0.5
LIG1-205ENST00000593425 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
LIG1-205ENST00000593425 B4GALT5O43286 388 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 RFPL2O75678 378 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 LYPLA2O95372 231 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 ADH1AP07327 375 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 NPR3P17342 541 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 ARF4P18085 180 aaPredicted RBP18.19■□□□□ 0.5
LIG1-205ENST00000593425 GLRA2P23416 452 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 ARL2P36404 184 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 CLCN5P51795 746 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 DSG1Q02413 1049 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 TFDP1Q14186 410 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 ASCL5Q7RTU5 278 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 GSTCDQ8NEC7 633 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 RXFP1Q9HBX9 757 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 SSX2IPQ9Y2D8 614 aa18.19■□□□□ 0.5
LIG1-205ENST00000593425 A0A087WWV3 80 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 PI15O43692 258 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 NARSO43776 548 aaKnown RBP18.18■□□□□ 0.5
LIG1-205ENST00000593425 DGAT1O75907 488 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 LARGE1O95461 756 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 GLUD1P00367 558 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 AKAP5P24588 427 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 NBL1P41271 181 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 POU5F1BQ06416 359 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 CALCRLQ16602 461 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms