RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 MYBP10242 640 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 SKIP12755 728 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 SLC27A1Q6PCB7 646 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 TOP1MTQ969P6 601 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 GSDMAQ96QA5 445 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 TARS2Q9BW92 718 aaKnown RBP17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 PTPRHQ9HD43 1115 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 USP20Q9Y2K6 914 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 PCDHA5Q9Y5H7 936 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 RANBP2P49792 3224 aaKnown RBP17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 UBE4BO95155 1302 aa17.14■□□□□ 0.33
SLC25A39-217ENST00000593166 TOM1L1O75674 476 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 STAG3L1P0CL83 205 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 PROZP22891 400 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 BMT2Q1RMZ1 405 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 TMEM132AQ24JP5 1023 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 DCAF4L1Q3SXM0 396 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 EEF1DP3Q658K8 133 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 MRPL10Q7Z7H8 261 aaKnown RBP17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 HERC6Q8IVU3 1022 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 GLIS3Q8NEA6 775 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 SMARCE1Q969G3 411 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 ACCSQ96QU6 501 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 ADPGKQ9BRR6 497 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 TMEM161AQ9NX61 479 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
SLC25A39-217ENST00000593166 ABLIM1O14639 778 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 PRPF6O94906 941 aaKnown RBP17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 GJB5O95377 273 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 EOMESO95936 686 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 ATF7P17544 494 aaPredicted RBP17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 STK4Q13043 487 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 MPZL3Q6UWV2 235 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 APBB1IPQ7Z5R6 666 aaPredicted RBP17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 CDR2LQ86X02 465 aaPredicted RBP17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 KIAA0895Q8NCT3 520 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 ZNF507Q8TCN5 953 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 SCFD1Q8WVM8 642 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 BICD1Q96G01 975 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 EIF2AQ9BY44 585 aaKnown RBP17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
SLC25A39-217ENST00000593166 NPTXRO95502 500 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 MCF2P10911 925 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 PTMSP20962 102 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 LIG4P49917 911 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 KCNA1Q09470 495 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 LRIT3Q3SXY7 679 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 SLC39A4Q6P5W5 647 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 ERCC4Q92889 916 aaPredicted RBP17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 PGBD4Q96DM1 585 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 GTPBP4Q9BZE4 634 aaKnown RBP17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 TRIM6Q9C030 488 aaPredicted RBP17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 NUP62CLQ9H1M0 184 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 CDT1Q9H211 546 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 IPPQ9Y573 584 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
SLC25A39-217ENST00000593166 PTPRSQ13332 1948 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 HOXA2O43364 376 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 HOXD13P35453 343 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 HTRA4P83105 476 aaPredicted RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 MCL1Q07820 350 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 CAMK4Q16566 473 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 TMCO2Q7Z6W1 182 aaPredicted RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 HACE1Q8IYU2 909 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 SMG8Q8ND04 991 aaKnown RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 RSPH1Q8WYR4 309 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 RC3H2Q9HBD1 1191 aaKnown RBP17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 LRFN2Q9ULH4 789 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
SLC25A39-217ENST00000593166 CLDN3O15551 220 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 DGKIO75912 1065 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 UPP2O95045 317 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 ZNF658Q5TYW1 1059 aaPredicted RBP17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 SYCP3Q8IZU3 236 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 ZBTB45Q96K62 511 aaPredicted RBP17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 TCHPQ9BT92 498 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 NXF3Q9H4D5 531 aaKnown RBP17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
SLC25A39-217ENST00000593166 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms