RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TBC1D7Q9P0N9 293 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 USP20Q9Y2K6 914 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 INSL6Q9Y581 213 aa16.41■□□□□ 0.22
DDX39A-221ENST00000593026 PVALEFA0A1B0GWK0 134 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 ZNF623O75123 536 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 NR1I2O75469 434 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 DGKIO75912 1065 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 EOMESO95936 686 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 ATF7P17544 494 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 GTF2BQ00403 316 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 ZC2HC1CQ53FD0 456 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 ZNF720Q7Z2F6 126 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 ZNF598Q86UK7 904 aaKnown RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 LRCH3Q96II8 777 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 TARS2Q9BW92 718 aaKnown RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 EIF2AQ9BY44 585 aaKnown RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 TBX20Q9UMR3 447 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 TNFSF13BQ9Y275 285 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 YBX2Q9Y2T7 364 aaKnown RBP16.4■□□□□ 0.22
DDX39A-221ENST00000593026 PCDHB2Q9Y5E7 798 aa16.4■□□□□ 0.22
DDX39A-221ENST00000593026 HOXA2O43364 376 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 KINO60870 393 aaKnown RBP16.39■□□□□ 0.21
DDX39A-221ENST00000593026 GCNT3O95395 438 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 NPTXRO95502 500 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 FGFR1P11362 822 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 MYOGP15173 224 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 APBB1IPQ7Z5R6 666 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-221ENST00000593026 TIFAQ96CG3 184 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 PGBD4Q96DM1 585 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 BICD1Q96G01 975 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 ACO2Q99798 780 aaKnown RBP16.39■□□□□ 0.21
DDX39A-221ENST00000593026 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
DDX39A-221ENST00000593026 LCHNA4D1U4 455 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 HNRNPDLO14979 420 aaKnown RBP16.38■□□□□ 0.21
DDX39A-221ENST00000593026 CA3P07451 260 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 ALCAMQ13740 583 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 POSTNQ15063 836 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 FAM26FQ5R3K3 315 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 ZPBP2Q6X784 338 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 STXBP4Q6ZWJ1 553 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 MRPL10Q7Z7H8 261 aaKnown RBP16.38■□□□□ 0.21
DDX39A-221ENST00000593026 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 ABI1Q8IZP0 508 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 SMG8Q8ND04 991 aaKnown RBP16.38■□□□□ 0.21
DDX39A-221ENST00000593026 LPPQ93052 612 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 ZNF689Q96CS4 500 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-221ENST00000593026 TIGD1Q96MW7 591 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 TCHPQ9BT92 498 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 SLC28A3Q9HAS3 691 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 RC3H2Q9HBD1 1191 aaKnown RBP16.38■□□□□ 0.21
DDX39A-221ENST00000593026 EXOC1Q9NV70 894 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 IPPQ9Y573 584 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
DDX39A-221ENST00000593026 LAMA3Q16787 3333 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 COL4A6Q14031 1691 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 GOLGA6L22H0YM25 854 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 KLRC4O43908 158 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 TOM1L1O75674 476 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 PPP1R37O75864 691 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 PIGRP01833 764 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 MYBP10242 640 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 ITGA4P13612 1032 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 LIG4P49917 911 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 GATMP50440 423 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 CASP5P51878 434 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 EHHADHQ08426 723 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 DPYDQ12882 1025 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 BTG3Q14201 252 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 PAN2Q504Q3 1202 aaKnown RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 SP7Q8TDD2 431 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 STRA6Q9BX79 667 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 FGFBP2Q9BYJ0 223 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 TMEM117Q9H0C3 514 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 PTPRHQ9HD43 1115 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
DDX39A-221ENST00000593026 EXOC7Q9UPT5 735 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 HES2Q9Y543 173 aa16.37■□□□□ 0.21
DDX39A-221ENST00000593026 TBKBP1A7MCY6 615 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 PROZP22891 400 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.21
DDX39A-221ENST00000593026 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 CLLU1OSQ5K130 101 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
DDX39A-221ENST00000593026 PPP2R2DQ66LE6 453 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms