RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CNTNAP2Q9UHC6 1331 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 TTC3P53804 2025 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 NPHP3-ACAD11A0A0J9YXS1 232 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 A0A1B0GUA9 196 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 CARNS1A5YM72 827 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 H0YCG3 227 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 ACKR2O00590 384 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 SLC16A4O15374 487 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 CUTAO60888 179 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCA1-227ENST00000591849 PPP6R2O75170 966 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 NR1I2O75469 434 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 OFD1O75665 1012 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 YEATS4O95619 227 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 PLS3P13797 630 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-227ENST00000591849 CA8P35219 290 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 STAT6P42226 847 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 MATR3P43243 847 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCA1-227ENST00000591849 ME1P48163 572 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-227ENST00000591849 AMHR2Q16671 573 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 FAM187BQ17R55 369 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 UBXN11Q5T124 520 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 USP49Q70CQ1 688 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 PDILTQ8N807 584 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 POF1BQ8WVV4 589 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
BRCA1-227ENST00000591849 RPS6KC1Q96S38 1066 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 RNF19AQ9NV58 838 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 SPG21Q9NZD8 308 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 STK17AQ9UEE5 414 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 PRRC2BQ5JSZ5 2229 aaKnown RBP11.09□□□□□ -0.63
BRCA1-227ENST00000591849 PTPRSQ13332 1948 aa11.09□□□□□ -0.63
BRCA1-227ENST00000591849 FGF18O76093 207 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 POMCP01189 267 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 ITGB1P05556 798 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 DNM1Q05193 864 aaKnown RBP11.08□□□□□ -0.64
BRCA1-227ENST00000591849 PKP1Q13835 747 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 DCAF4L1Q3SXM0 396 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 ATF7IP2Q5U623 682 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 AGMOQ6ZNB7 445 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 LRRC55Q6ZSA7 311 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 TMEM87AQ8NBN3 555 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 SMG8Q8ND04 991 aaKnown RBP11.08□□□□□ -0.64
BRCA1-227ENST00000591849 SPPL3Q8TCT6 385 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 SPIRE2Q8WWL2 714 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 BICD1Q96G01 975 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 MRPL4Q9BYD3 311 aaKnown RBP11.08□□□□□ -0.64
BRCA1-227ENST00000591849 NSUN3Q9H649 340 aaKnown RBP11.08□□□□□ -0.64
BRCA1-227ENST00000591849 IGFLR1Q9H665 355 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 TMEM134Q9H6X4 195 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 CWH43Q9H720 699 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 THEGQ9P2T0 379 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 HCSTQ9UBK5 93 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 ODF2LQ9ULJ1 636 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 GIT1Q9Y2X7 761 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 HES2Q9Y543 173 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 BRWD1Q9NSI6 2320 aa11.08□□□□□ -0.64
BRCA1-227ENST00000591849 WDR81Q562E7 1941 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 SIP14410 1827 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 MEIS3P2A8K0S8 358 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 ALDH2P05091 517 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 AKAP5P24588 427 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 PBX3P40426 434 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 YARSP54577 528 aaKnown RBP11.07□□□□□ -0.64
BRCA1-227ENST00000591849 BCAR1P56945 870 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 UBE3AQ05086 875 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 MAPK7Q13164 816 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 AAK1Q2M2I8 961 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 ARSHQ5FYA8 562 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 TCEAL5Q5H9L2 206 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 DYMQ7RTS9 669 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 ZBTB33Q86T24 672 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 DAW1Q8N136 415 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 HLA-CQ95604 372 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 TMEM169Q96HH4 297 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 GAD1Q99259 594 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 REEP2Q9BRK0 252 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 NXF3Q9H4D5 531 aaKnown RBP11.07□□□□□ -0.64
BRCA1-227ENST00000591849 PDZD7Q9H5P4 517 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 PARVGQ9HBI0 331 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 ENTPD7Q9NQZ7 604 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 BLOC1S4Q9NUP1 217 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 TBC1D13Q9NVG8 400 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 COG5Q9UP83 839 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 FAN1Q9Y2M0 1017 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 GDAQ9Y2T3 454 aa11.07□□□□□ -0.64
BRCA1-227ENST00000591849 MORC2Q9Y6X9 1032 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-227ENST00000591849 COL4A4P53420 1690 aaPredicted RBP11.07□□□□□ -0.64
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