RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PIN4Q9Y237 131 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 HCFC2Q9Y5Z7 792 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 MEIS3P2A8K0S8 358 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 NT5C1B-RDH14C9J2C7 533 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 SLITRK3O94933 977 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 CTSAP10619 480 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 HOXA11P31270 313 aaPredicted RBP11.62□□□□□ -0.55
VPS4B-207ENST00000591519 YWHABP31946 246 aaKnown RBP11.62□□□□□ -0.55
VPS4B-207ENST00000591519 NHLH1Q02575 133 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 POU5F1BQ06416 359 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 SIGLEC14Q08ET2 396 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 LAMTOR4Q0VGL1 99 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 PCBP1Q15365 356 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS4B-207ENST00000591519 AGMOQ6ZNB7 445 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 PIK3AP1Q6ZUJ8 805 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 VPS52Q8N1B4 723 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 TCP11Q8WWU5 503 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 LPPQ93052 612 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 PBXIP1Q96AQ6 731 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 NECTIN4Q96NY8 510 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 MTRQ99707 1265 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 HSD17B14Q9BPX1 270 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 ZBP1Q9H171 429 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 ZSWIM4Q9H7M6 989 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 ORC3Q9UBD5 711 aaPredicted RBP11.62□□□□□ -0.55
VPS4B-207ENST00000591519 STK39Q9UEW8 545 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
VPS4B-207ENST00000591519 LYPLA2O95372 231 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
VPS4B-207ENST00000591519 ALDH2P05091 517 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 SRGAP2CP0DJJ0 459 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 AK2P54819 239 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 PTPN21Q16825 1174 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 UBXN11Q5T124 520 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 CES5AQ6NT32 575 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 LLGL2Q6P1M3 1020 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 TMEM173Q86WV6 379 aaPredicted RBP11.61□□□□□ -0.55
VPS4B-207ENST00000591519 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 SLC22A17Q8WUG5 538 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 TMEM143Q96AN5 459 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 ASIC4Q96FT7 647 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 LXNQ9BS40 222 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 MINDY3Q9H8M7 445 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 RGL1Q9NZL6 768 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 KANSL3Q9P2N6 904 aa11.61□□□□□ -0.55
VPS4B-207ENST00000591519 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 ZBTB39O15060 712 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 INPPL1O15357 1258 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 MARCH6O60337 910 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 EIF5BO60841 1220 aaKnown RBP11.6□□□□□ -0.55
VPS4B-207ENST00000591519 DTNBO60941 627 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 LILRB3O75022 631 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 ZC3H11AO75152 810 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS4B-207ENST00000591519 DDHD2O94830 711 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 XRCC6P12956 609 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS4B-207ENST00000591519 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
VPS4B-207ENST00000591519 AXLP30530 894 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 MTHFRP42898 656 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 SLC11A1P49279 550 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
VPS4B-207ENST00000591519 MXD4Q14582 209 aaPredicted RBP11.6□□□□□ -0.55
VPS4B-207ENST00000591519 PPFIBP1Q86W92 1011 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 FBXL6Q8N531 539 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 DYDC2Q96IM9 177 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 PRRX2Q99811 253 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 TMEM175Q9BSA9 504 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 ANKEF1Q9NU02 776 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 NR2E1Q9Y466 385 aa11.6□□□□□ -0.55
VPS4B-207ENST00000591519 MYO10Q9HD67 2058 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 B4GALT3O60512 393 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 EFEMP2O95967 443 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 KRT2P35908 639 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 AFF1P51825 1210 aaKnown RBP11.59□□□□□ -0.55
VPS4B-207ENST00000591519 PTENP60484 403 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 NR5A1Q13285 461 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 CTTNQ14247 550 aaKnown RBP11.59□□□□□ -0.55
VPS4B-207ENST00000591519 EMC2Q15006 297 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 ME3Q16798 604 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 LONRF3Q496Y0 759 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 XKR9Q5GH70 373 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 ATAT1Q5SQI0 421 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 ALYREFQ86V81 257 aaKnown RBP11.59□□□□□ -0.55
VPS4B-207ENST00000591519 RNF149Q8NC42 400 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 BCL7CQ8WUZ0 217 aaPredicted RBP11.59□□□□□ -0.55
VPS4B-207ENST00000591519 GTF3C6Q969F1 213 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 CCDC51Q96ER9 411 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 RIPOR3Q96MK2 946 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 MTMR9Q96QG7 549 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 APOL5Q9BWW9 433 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 VN1R3Q9BXE9 311 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 POMKQ9H5K3 350 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms