RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CREB3L3Q68CJ9 461 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 TAPT1Q6NXT6 567 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 STOX1Q6ZVD7 989 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 DEFB123Q8N688 67 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 DNERQ8NFT8 737 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 SYTL5Q8TDW5 730 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-219ENST00000589349 PPP1R13LQ8WUF5 828 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 COPS5Q92905 334 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 GATA6Q92908 595 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 CUL5Q93034 780 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 RRP36Q96EU6 259 aaKnown RBP9.48□□□□□ -0.89
DNMT1-219ENST00000589349 TMEM74Q96NL1 305 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
DNMT1-219ENST00000589349 PRO3102Q9H379 93 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 MAD2L2Q9UI95 211 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 TLR6Q9Y2C9 796 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 SLC12A7Q9Y666 1083 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 ASTN1O14525 1302 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 ELP1O95163 1332 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 ALPK3Q96L96 1907 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 PRAMEF27A3QJZ7 478 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 PRR19A6NJB7 356 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 CDC45O75419 566 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 RXRAP19793 462 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 CST5P28325 142 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-219ENST00000589349 LMNB2Q03252 620 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 INPP5AQ14642 412 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 SNX17Q15036 470 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 LY6KQ17RY6 165 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 TSNAXIP1Q2TAA8 658 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 BMP2KLQ5H9B9 411 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 C9orf50Q5SZB4 431 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-219ENST00000589349 Q7L0L9 218 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 CYFIP1Q7L576 1253 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 TMEM199Q8N511 208 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 SMARCC2Q8TAQ2 1214 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 ZNF507Q8TCN5 953 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 LSG1Q9H089 658 aaKnown RBP9.47□□□□□ -0.89
DNMT1-219ENST00000589349 MRVI1Q9Y6F6 885 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 FRMPD3Q5JV73 1810 aa9.47□□□□□ -0.89
DNMT1-219ENST00000589349 MCM3APO60318 1980 aa9.46□□□□□ -0.89
DNMT1-219ENST00000589349 NKRFO15226 690 aaKnown RBP eCLIP9.46□□□□□ -0.9
DNMT1-219ENST00000589349 TIMP1P01033 207 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 GH1P01241 217 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 ACRP10323 421 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 GBP2P32456 591 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-219ENST00000589349 CYP2C18P33260 490 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 GNAQP50148 359 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 CCL23P55773 120 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 PPIGQ13427 754 aaKnown RBP eCLIP9.46□□□□□ -0.92e-6■■□□□ 11.4
DNMT1-219ENST00000589349 CYP27C1Q4G0S4 372 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 CCSAPQ6IQ19 270 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-219ENST00000589349 OGFOD3Q6PK18 319 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 ANKRD33Q7Z3H0 272 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 MICU3Q86XE3 530 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-219ENST00000589349 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 TMEM87BQ96K49 555 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 TOX2Q96NM4 488 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 IWS1Q96ST2 819 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-219ENST00000589349 TRPV6Q9H1D0 765 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 HIPK3Q9H422 1215 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 Q9Y3F1 56 aa9.46□□□□□ -0.9
DNMT1-219ENST00000589349 LOC102724159A0A0B4J2E5 919 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 hCG_1642624A0A1W2PR95 340 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 FAM170BA6NMN3 283 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 KIAA0355O15063 1070 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 KPNA6O60684 536 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 EIF3JO75822 258 aaKnown RBP9.45□□□□□ -0.9
DNMT1-219ENST00000589349 DDAH1O94760 285 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CALM1P0DP23 149 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CALM2P0DP24 149 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CALM3P0DP25 149 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CSF2RAP15509 400 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CASTP20810 708 aaKnown RBP9.45□□□□□ -0.9
DNMT1-219ENST00000589349 ITGB8P26012 769 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CCND2P30279 289 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 NTF4P34130 210 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CD97P48960 835 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 ANTXR2P58335 489 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 RPL6Q02878 288 aaKnown RBP9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 CAMK2GQ13555 558 aaPredicted RBP9.45□□□□□ -0.9
DNMT1-219ENST00000589349 PWP2Q15269 919 aaKnown RBP9.45□□□□□ -0.9
DNMT1-219ENST00000589349 LRIT3Q3SXY7 679 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 HS2ST1Q7LGA3 356 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 ERMP1Q7Z2K6 904 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
DNMT1-219ENST00000589349 TMEM87AQ8NBN3 555 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 IGDCC4Q8TDY8 1250 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 MORC4Q8TE76 937 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
DNMT1-219ENST00000589349 NEK1Q96PY6 1258 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms