RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ZSCAN20P17040 1043 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 ARF4P18085 180 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 DCAF4L1Q3SXM0 396 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 KLHL10Q6JEL2 608 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 MPZL3Q6UWV2 235 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 C7orf61Q8IZ16 206 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 RPUSD2Q8IZ73 545 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 WNT8AQ9H1J5 351 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 TSPY26PQ9H489 355 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 AGPAT3Q9NRZ7 376 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 CTNND2Q9UQB3 1225 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 PIN4Q9Y237 131 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 NR2E3Q9Y5X4 410 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 STYXL1Q9Y6J8 313 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 TRIM43BA6NCK2 446 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 SKIP12755 728 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 CD44P16070 742 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 CD52P31358 61 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 CYP2C18P33260 490 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 HOXD13P35453 343 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 KCNA1Q09470 495 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 NFX1Q12986 1120 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 MBTPS1Q14703 1052 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 ZCWPW2Q504Y3 356 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 PLEKHG4Q58EX7 1191 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 ARMCX5Q6P1M9 558 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 SLC27A1Q6PCB7 646 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 SLC9A9Q8IVB4 645 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 TRIM43Q96BQ3 446 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 TARS2Q9BW92 718 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 TRAIPQ9BWF2 469 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 DNAJC25Q9H1X3 360 aa18.56■□□□□ 0.56
SCAMP4-211ENST00000588907 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 TGFB1I1O43294 461 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 EFCAB14O75071 495 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 CSDE1O75534 798 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 LDHAP00338 332 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 MCF2P10911 925 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 PROZP22891 400 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 MATR3P43243 847 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 ZNF165P49910 485 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 RAB27AP51159 221 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 CCL23P55773 120 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 FKBP3Q00688 224 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 MCL1Q07820 350 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 NOLC1Q14978 699 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 ZNF568Q3ZCX4 644 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 HACE1Q8IYU2 909 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 ENOX1Q8TC92 643 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 NOC3LQ8WTT2 800 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 POMGNT1Q8WZA1 660 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 DPF3Q92784 378 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 TCHPQ9BT92 498 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 TRIM6Q9C030 488 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 SEMA6BQ9H3T3 888 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 AGO3Q9H9G7 860 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 KIAA1586Q9HCI6 787 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 PTPRHQ9HD43 1115 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 C1orf112Q9NSG2 853 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 ANKFY1Q9P2R3 1169 aa18.55■□□□□ 0.56
SCAMP4-211ENST00000588907 B4GALT5O43286 388 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 NBNO60934 754 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 HOXA11P31270 313 aaPredicted RBP18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 POU5F1Q01860 360 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 MYL5Q02045 173 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 PPIGQ13427 754 aaKnown RBP eCLIP18.54■□□□□ 0.565e-11■□□□□ 9.3
SCAMP4-211ENST00000588907 TPD52L1Q16890 204 aaPredicted RBP18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 TWF2Q6IBS0 349 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 TTI2Q6NXR4 508 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 CNKSR3Q6P9H4 555 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 CEP63Q96MT8 703 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 PDZD7Q9H5P4 517 aa18.54■□□□□ 0.56
SCAMP4-211ENST00000588907 A0A0B4J269 797 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 SMTNL1A8MU46 457 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 IKBKBO14920 756 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 CETN3O15182 167 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 GNA14O95837 355 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 NR3C1P04150 777 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 FGFR4P22455 802 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 NR2F2P24468 414 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 SLC39A4Q6P5W5 647 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 C11orf57Q6ZUT1 292 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 CSGALNACT2Q8N6G5 542 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 FAM200AQ8TCP9 573 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 SCLYQ96I15 445 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 LBHD1Q9BQE6 289 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 MSTO1Q9BUK6 570 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 AGO2Q9UKV8 859 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 FRMD4BQ9Y2L6 1034 aa18.53■□□□□ 0.56
SCAMP4-211ENST00000588907 BECN2A8MW95 431 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 MAPK13O15264 365 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 OGTO15294 1046 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 EDN1P05305 212 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 ACTN1P12814 892 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 TPM4P67936 248 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 FPGSQ05932 587 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 SPATA1Q5VX52 437 aa18.52■□□□□ 0.56
SCAMP4-211ENST00000588907 ANKRD40Q6AI12 368 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms