RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 HVCN1Q96D96 273 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 BICD1Q96G01 975 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 SLC9A7Q96T83 725 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 TRAIPQ9BWF2 469 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 IKZF4Q9H2S9 585 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 FAM105AQ9NUU6 356 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 A0A0U1RQF3 1178 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 N4BP3O15049 544 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 NPTXRO95502 500 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 STK4Q13043 487 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 ALCAMQ13740 583 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 KCNB1Q14721 858 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 FAM109BQ6ICB4 259 aaPredicted RBP20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 SLC27A1Q6PCB7 646 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 EPM2AIP1Q7L775 607 aaPredicted RBP20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 ECHDC2Q86YB7 292 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 SMARCE1Q969G3 411 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 CLSTN2Q9H4D0 955 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 TNFSF13BQ9Y275 285 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 PCDHB13Q9Y5F0 798 aa20.82■□□□□ 0.92
CLPTM1-209ENST00000588855 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 UPP2O95045 317 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 SMC2O95347 1197 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 MBD3O95983 291 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 PIGRP01833 764 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 ATP2A2P16615 1042 aaKnown RBP20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 ATF7P17544 494 aaPredicted RBP20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 FAM189BP81408 668 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 PSMD2Q13200 908 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 FAM117BQ6P1L5 589 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 ZPBP2Q6X784 338 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 STXBP4Q6ZWJ1 553 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 TOP1MTQ969P6 601 aa20.81■□□□□ 0.92
CLPTM1-209ENST00000588855 COL4A6Q14031 1691 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 GRXCR1A8MXD5 290 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 ABLIM1O14639 778 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 EIF3DO15371 548 aaKnown RBP eCLIP20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 PROZP22891 400 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 LIG4P49917 911 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 RAB27AP51159 221 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 SLC39A4Q6P5W5 647 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 NPAS4Q8IUM7 802 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 CRIPAKQ8N1N5 446 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 PHOSPHO2Q8TCD6 241 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 SCFD1Q8WVM8 642 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 ZBTB45Q96K62 511 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 GSDMAQ96QA5 445 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 ACCSQ96QU6 501 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 PTPRHQ9HD43 1115 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 ANKFY1Q9P2R3 1169 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 GDAQ9Y2T3 454 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 PCDHB2Q9Y5E7 798 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 ZMYM2Q9UBW7 1377 aa20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 FNDC1Q4ZHG4 1894 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-209ENST00000588855 A0A1W2PPC1 479 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 TISP43B9A030 160 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 TOM1L1O75674 476 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 HOXD13P35453 343 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 ZNF568Q3ZCX4 644 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 ZNF598Q86UK7 904 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 HERC6Q8IVU3 1022 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 RNF169Q8NCN4 708 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 SMG8Q8ND04 991 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 ZNF507Q8TCN5 953 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 ADPGKQ9BRR6 497 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 TRIM6Q9C030 488 aaPredicted RBP20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 NUP62CLQ9H1M0 184 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 CDT1Q9H211 546 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 NXF3Q9H4D5 531 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 RMND1Q9NWS8 449 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 HES2Q9Y543 173 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 IPPQ9Y573 584 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 UBE4BO95155 1302 aa20.79■□□□□ 0.92
CLPTM1-209ENST00000588855 ANKRD63C9JTQ0 380 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 GJB5O95377 273 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 DCAF4L1Q3SXM0 396 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 MPZL3Q6UWV2 235 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 ZBTB33Q86T24 672 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 NELFCDQ8IXH7 590 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 LPPQ93052 612 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 HAPLN2Q9GZV7 340 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 ELAC1Q9H777 363 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 MAN1B1Q9UKM7 699 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 LRFN2Q9ULH4 789 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 EXOC7Q9UPT5 735 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 PCDHB7Q9Y5E2 793 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 MEIS3P2A8K0S8 358 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 ZNF623O75123 536 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 STAG3L1P0CL83 205 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 HARSP12081 509 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 SKIP12755 728 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 BMT2Q1RMZ1 405 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 SMYD4Q8IYR2 804 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 SYCP3Q8IZU3 236 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 TCHPQ9BT92 498 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 TMEM206Q9H813 350 aa20.78■□□□□ 0.92
CLPTM1-209ENST00000588855 FGFR1P11362 822 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 MATR3P43243 847 aaKnown RBP eCLIP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms