RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 ADAMTS10Q9H324 1103 aa33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 TRIM14Q14142 442 aa33.85■■■■□ 3.01
CAPNS1-206ENST00000588815 TSHZ1Q6ZSZ6 1077 aa33.85■■■■□ 3.01
CAPNS1-206ENST00000588815 USP37Q86T82 979 aa33.85■■■■□ 3.01
CAPNS1-206ENST00000588815 RSPH3Q86UC2 560 aa33.85■■■■□ 3.01
CAPNS1-206ENST00000588815 IQCDQ96DY2 449 aa33.85■■■■□ 3.01
CAPNS1-206ENST00000588815 HTTP42858 3142 aa33.85■■■■□ 3.01
CAPNS1-206ENST00000588815 GPR32O75388 356 aa33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 BFSP1Q12934 665 aa33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 SNRNP35Q16560 246 aaKnown RBP33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 RPAINQ86UA6 219 aa33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 DNAJB3Q8WWF6 145 aa33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 UNC93B1Q9H1C4 597 aa33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 AGO2Q9UKV8 859 aaKnown RBP33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 CNTNAP2Q9UHC6 1331 aa33.84■■■■□ 3.01
CAPNS1-206ENST00000588815 A0A0B4J269 797 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 CLDN3O15551 220 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 EXTL3O43909 919 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 AFPP02771 609 aaKnown RBP33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 ZNF200P98182 395 aaPredicted RBP33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 KCNH2Q12809 1159 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 ITGA7Q13683 1181 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 FAM47CQ5HY64 1035 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 GDF6Q6KF10 455 aaPredicted RBP33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 SLC35C1Q96A29 364 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 MINDY3Q9H8M7 445 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 TNFSF13BQ9Y275 285 aa33.83■■■■□ 3.01
CAPNS1-206ENST00000588815 KBTBD13C9JR72 458 aa33.82■■■■□ 3.01
CAPNS1-206ENST00000588815 EDN1P05305 212 aa33.82■■■■□ 3.01
CAPNS1-206ENST00000588815 HSPA8P11142 646 aaKnown RBP33.82■■■■□ 3.01
CAPNS1-206ENST00000588815 PKN2Q16513 984 aaKnown RBP33.82■■■■□ 3.01
CAPNS1-206ENST00000588815 SERINC5Q86VE9 423 aa33.82■■■■□ 3.01
CAPNS1-206ENST00000588815 PROZP22891 400 aa33.82■■■■□ 3
CAPNS1-206ENST00000588815 TBX2Q13207 712 aaPredicted RBP33.82■■■■□ 3
CAPNS1-206ENST00000588815 ATF7IP2Q5U623 682 aa33.82■■■■□ 3
CAPNS1-206ENST00000588815 PPP1R13LQ8WUF5 828 aa33.82■■■■□ 3
CAPNS1-206ENST00000588815 VTI1AQ96AJ9 217 aa33.82■■■■□ 3
CAPNS1-206ENST00000588815 ZNF668Q96K58 619 aaPredicted RBP33.82■■■■□ 3
CAPNS1-206ENST00000588815 NUP58Q9BVL2 599 aa33.82■■■■□ 3
CAPNS1-206ENST00000588815 PHF24Q9UPV7 400 aa33.82■■■■□ 3
CAPNS1-206ENST00000588815 GRIN2DO15399 1336 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 MCL1Q07820 350 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 AMHR2Q16671 573 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 KIZQ2M2Z5 673 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 DCAF17Q5H9S7 520 aaPredicted RBP33.81■■■■□ 3
CAPNS1-206ENST00000588815 TCERG1LQ5VWI1 586 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 FBXO46Q6PJ61 603 aaPredicted RBP33.81■■■■□ 3
CAPNS1-206ENST00000588815 MPZL3Q6UWV2 235 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 CCDC186Q7Z3E2 898 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 RDH13Q8NBN7 331 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 MFSD14AQ96MC6 490 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 MSTO1Q9BUK6 570 aa33.81■■■■□ 3
CAPNS1-206ENST00000588815 GTPBP10A4D1E9 387 aaKnown RBP33.8■■■■□ 3
CAPNS1-206ENST00000588815 ZNF233A6NK53 670 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 DNM1LO00429 736 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 ERLIN2O94905 339 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 TPM1P09493 284 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 ANK1P16157 1881 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 MATR3P43243 847 aaKnown RBP eCLIP33.8■■■■□ 3
CAPNS1-206ENST00000588815 VAMP7P51809 220 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 CCDC150Q8NCX0 1101 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 TMC2Q8TDI7 906 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 SAAL1Q96ER3 474 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 PTPRHQ9HD43 1115 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 ANKFY1Q9P2R3 1169 aa33.8■■■■□ 3
CAPNS1-206ENST00000588815 CENPFP49454 3210 aa33.79■■■■□ 3
CAPNS1-206ENST00000588815 M0QZ92 97 aa33.79■■■■□ 3
CAPNS1-206ENST00000588815 STX10O60499 249 aa33.79■■■■□ 3
CAPNS1-206ENST00000588815 IQCF3P0C7M6 154 aa33.79■■■■□ 3
CAPNS1-206ENST00000588815 DARSP14868 501 aaKnown RBP33.79■■■■□ 3
CAPNS1-206ENST00000588815 CRYBB1P53674 252 aaPredicted RBP33.79■■■■□ 3
CAPNS1-206ENST00000588815 NCBP1Q09161 790 aaKnown RBP33.79■■■■□ 3
CAPNS1-206ENST00000588815 TCHPQ9BT92 498 aa33.79■■■■□ 3
CAPNS1-206ENST00000588815 CITO14578 2027 aa33.79■■■■□ 3
CAPNS1-206ENST00000588815 A0A1W2PQ45 241 aaPredicted RBP33.78■■■■□ 3
CAPNS1-206ENST00000588815 A0A1W2PQY0 241 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 CCL5P13501 91 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 EIF4BP23588 611 aaKnown RBP33.78■■■■□ 3
CAPNS1-206ENST00000588815 NOLC1Q14978 699 aaKnown RBP eCLIP33.78■■■■□ 3
CAPNS1-206ENST00000588815 SYCP1Q15431 976 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 TMEM132AQ24JP5 1023 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 FIGNQ5HY92 759 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 PPFIBP1Q86W92 1011 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 CBWD2Q8IUF1 395 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 ZBTB45Q96K62 511 aaPredicted RBP33.78■■■■□ 3
CAPNS1-206ENST00000588815 PPP1R16BQ96T49 567 aa33.78■■■■□ 3
CAPNS1-206ENST00000588815 A0A0U1RQG5 324 aaPredicted RBP33.77■■■■□ 3
CAPNS1-206ENST00000588815 GOLGA8IPA6NC78 632 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 GOLGA8JA6NMD2 632 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 ABLIM1O14639 778 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 OGTO15294 1046 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 N4BP1O75113 896 aaKnown RBP33.77■■■■□ 3
CAPNS1-206ENST00000588815 PTGISQ16647 500 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 SLC43A3Q8NBI5 491 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 HAPLN2Q9GZV7 340 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 RNF208Q9H0X6 261 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 STARD7Q9NQZ5 370 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 OGDHLQ9ULD0 1010 aa33.77■■■■□ 3
CAPNS1-206ENST00000588815 TTLL13PA6NNM8 815 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms