RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 A0A1W2PQ27 194 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 A0A1W2PQ64 194 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 A0A1W2PQD8 194 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 HOXA2O43364 376 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 TRAK2O60296 914 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 NPTXRO95502 500 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 HAUS6Q7Z4H7 955 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 HELQQ8TDG4 1101 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 CDX2Q99626 313 aaPredicted RBP22.23■■□□□ 1.15
DDX39A-207ENST00000588542 ACO2Q99798 780 aaKnown RBP22.23■■□□□ 1.15
DDX39A-207ENST00000588542 RNF39Q9H2S5 420 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 ZHX3Q9H4I2 956 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 HCSTQ9UBK5 93 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 MTUS1Q9ULD2 1270 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 ATG2AQ2TAZ0 1938 aa22.23■■□□□ 1.15
DDX39A-207ENST00000588542 PLXNA4Q9HCM2 1894 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 FRMD3A2A2Y4 597 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 RFXAPO00287 272 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 N4BP3O15049 544 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 ACTN4O43707 911 aaKnown RBP22.22■■□□□ 1.15
DDX39A-207ENST00000588542 LRRC55Q6ZSA7 311 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 SFR1Q86XK3 245 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 CNNM3Q8NE01 707 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 PGBD4Q96DM1 585 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 PYM1Q9BRP8 204 aaKnown RBP22.22■■□□□ 1.15
DDX39A-207ENST00000588542 TRIM9Q9C026 710 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 GOLPH3LQ9H4A5 285 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 MAGEF1Q9HAY2 307 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 SERTAD1Q9UHV2 236 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 HES2Q9Y543 173 aa22.22■■□□□ 1.15
DDX39A-207ENST00000588542 REV3LO60673 3130 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 OFD1O75665 1012 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 NMT1P30419 496 aaKnown RBP22.21■■□□□ 1.15
DDX39A-207ENST00000588542 NDUFA8P51970 172 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 EPC2Q52LR7 807 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 ATF7IP2Q5U623 682 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 CNNM4Q6P4Q7 775 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 FAM178BQ8IXR5 827 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 TMEM192Q8IY95 271 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 MYLIPQ8WY64 445 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 SAMD11Q96NU1 681 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 TARS2Q9BW92 718 aaKnown RBP22.21■■□□□ 1.15
DDX39A-207ENST00000588542 MRPL4Q9BYD3 311 aaKnown RBP22.21■■□□□ 1.15
DDX39A-207ENST00000588542 NXF3Q9H4D5 531 aaKnown RBP22.21■■□□□ 1.15
DDX39A-207ENST00000588542 CWH43Q9H720 699 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 PTPRHQ9HD43 1115 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 TYW1Q9NV66 732 aaKnown RBP22.21■■□□□ 1.15
DDX39A-207ENST00000588542 TNFSF13BQ9Y275 285 aa22.21■■□□□ 1.15
DDX39A-207ENST00000588542 EYSQ5T1H1 3165 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 H0YCG3 227 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 K7ENM7 598 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 SLFN14P0C7P3 912 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 ITGA4P13612 1032 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 GAP43P17677 238 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 ADGRE1Q14246 886 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 TMEM132AQ24JP5 1023 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 TPRNQ4KMQ1 711 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 ABI1Q8IZP0 508 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 FSIP1Q8NA03 581 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 MRPS27Q92552 414 aaKnown RBP22.2■■□□□ 1.14
DDX39A-207ENST00000588542 C7orf25Q9BPX7 421 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 TRIM6Q9C030 488 aaPredicted RBP22.2■■□□□ 1.14
DDX39A-207ENST00000588542 LRRC27Q9C0I9 530 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 ST6GALNAC4Q9H4F1 302 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 SEL1LQ9UBV2 794 aa22.2■■□□□ 1.14
DDX39A-207ENST00000588542 CITO14578 2027 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 COL6A3P12111 3177 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 ABLIM1O14639 778 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 IDEP14735 1019 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 PROZP22891 400 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 CASP1P29466 404 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 BMPR1AP36894 532 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 AFF1P51825 1210 aaKnown RBP22.19■■□□□ 1.14
DDX39A-207ENST00000588542 GTF2BQ00403 316 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 AMPD3Q01432 767 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 STRN3Q13033 797 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 ZNF720Q7Z2F6 126 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 GRAMD1CQ8IYS0 662 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 FBXO22Q8NEZ5 403 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 STRA6Q9BX79 667 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 RSAD1Q9HA92 442 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 PANK4Q9NVE7 773 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 TBX20Q9UMR3 447 aa22.19■■□□□ 1.14
DDX39A-207ENST00000588542 C5orf67F2Z3F1 127 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 LPXNO60711 386 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 SCP2P22307 547 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 CTNNB1P35222 781 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 SYKP43405 635 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 ZC2HC1CQ53FD0 456 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-207ENST00000588542 HERC4Q5GLZ8 1057 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-207ENST00000588542 GLB1LQ6UWU2 654 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 CEP57L1Q8IYX8 460 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 LRRC43Q8N309 656 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 GDPD5Q8WTR4 605 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 ZBTB45Q96K62 511 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-207ENST00000588542 ADPGKQ9BRR6 497 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 APOL6Q9BWW8 343 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 CDT1Q9H211 546 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 OLFML3Q9NRN5 406 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms