RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	TIAM2	Q8IVF5	1701 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792		A0A0U1RQG5	324 aa	Predicted RBP	5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	KRIT1	O00522	736 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	NPR1	P16066	1061 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	VAMP1	P23763	118 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	ALDH1B1	P30837	517 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	HLF	Q16534	295 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	TWISTNB	Q3B726	338 aa	Predicted RBP	5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	STYK1	Q6J9G0	422 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	GIMAP6	Q6P9H5	292 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	WDR63	Q8IWG1	891 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	TSR2	Q969E8	191 aa	Known RBP	5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	UTP14A	Q9BVJ6	771 aa	Known RBP	5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	OAZ3	Q9UMX2	235 aa		5.83	□□□□□ -1.48
ZNF540-204	ENST00000586792	RIC1	Q4ADV7	1423 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	KDM2B	Q8NHM5	1336 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	FANCI	Q9NVI1	1328 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792		H0Y858	1186 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	CCER2	I3L3R5	266 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	MAFG	O15525	162 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZNF853	P0CG23	659 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	KCNA3	P22001	575 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	NEXN	Q0ZGT2	675 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	PROSER3	Q2NL68	480 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	CCDC93	Q567U6	631 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	FNDC7	Q5VTL7	733 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	PROSER1	Q86XN7	944 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	CCDC103	Q8IW40	242 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	PLBD2	Q8NHP8	589 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	MORC4	Q8TE76	937 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	RBM17	Q96I25	401 aa	Known RBP	5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	TAOK3	Q9H2K8	898 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	MSL2	Q9HCI7	577 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	RNF181	Q9P0P0	153 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	ARHGAP20	Q9P2F6	1191 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	RBPJL	Q9UBG7	517 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	ASH2L	Q9UBL3	628 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	TRMT112	Q9UI30	125 aa	Known RBP	5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZFP69B	Q9UJL9	534 aa		5.82	□□□□□ -1.48
ZNF540-204	ENST00000586792	ABCC12	Q96J65	1359 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	UBN2	Q6ZU65	1347 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	SH3TC1	Q8TE82	1336 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	RAB11FIP3	O75154	756 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	SRGN	P10124	158 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	HOXC12	P31275	282 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	RPS19	P39019	145 aa	Known RBP	5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	GIPR	P48546	466 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	ANAPC15	P60006	121 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	TCIRG1	Q13488	830 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZMAT1	Q5H9K5	638 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	PHF19	Q5T6S3	580 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	SUSD4	Q5VX71	490 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	VHLL	Q6RSH7	139 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	CCDC81	Q6ZN84	652 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	DPH6	Q7L8W6	267 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	ULK2	Q8IYT8	1036 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZNF34	Q8IZ26	560 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	C8orf58	Q8NAV2	365 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	TMEM87A	Q8NBN3	555 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	RCBTB1	Q8NDN9	531 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	KCND1	Q9NSA2	647 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	CLDND1	Q9NY35	253 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	PCDHA2	Q9Y5H9	948 aa		5.81	□□□□□ -1.48
ZNF540-204	ENST00000586792	ADCY9	O60503	1353 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	LAMB2	P55268	1798 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	CDC14B	O60729	498 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	NTSR2	O95665	410 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	CP	P00450	1065 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	CKM	P06732	381 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	ENO2	P09104	434 aa	Predicted RBP	5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	HIBADH	P31937	336 aa	Known RBP	5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	TESK1	Q15569	626 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	PPP2R5E	Q16537	467 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	SKIDA1	Q1XH10	827 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	PCSK4	Q6UW60	755 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	DDX46	Q7L014	1031 aa	Known RBP	5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	RTKN2	Q8IZC4	609 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	PPP1R14A	Q96A00	147 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	MRGPRX3	Q96LB0	322 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	OR14A2	Q96R54	314 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	MYD88	Q99836	296 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	UTRN	P46939	3433 aa		5.8	□□□□□ -1.48
ZNF540-204	ENST00000586792	hCG_2014768	A0A024R1R8	64 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	TCERG1	O14776	1098 aa	Known RBP	5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	CUTA	O60888	179 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZNF888	P0CJ79	500 aa	Predicted RBP	5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	IBSP	P21815	317 aa	Predicted RBP	5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	FBL	P22087	321 aa	Known RBP	5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	LTBR	P36941	435 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	GLRB	P48167	497 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	IGBP1	P78318	339 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	EXOSC9	Q06265	439 aa	Known RBP	5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	CCDC142	Q17RM4	750 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	ZNF662	Q6ZS27	426 aa		5.79	□□□□□ -1.48
ZNF540-204	ENST00000586792	LRP10	Q7Z4F1	713 aa		5.79	□□□□□ -1.48

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