RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 USP20Q9Y2K6 914 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 MUC3AQ02505 3323 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 SOWAHDA6NJG2 315 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 H0YCG3 227 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 C22orf31O95567 290 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 INSRRP14616 1297 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 CLCN1P35523 988 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 KRT9P35527 623 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 APBA1Q02410 837 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 MTF1Q14872 753 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 NOLC1Q14978 699 aaKnown RBP eCLIP11.1□□□□□ -0.63
APOC1-201ENST00000586638 ZNF484Q5JVG2 852 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 SLC9A9Q8IVB4 645 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 PPP1R13LQ8WUF5 828 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 CCDC51Q96ER9 411 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 PPP1R16BQ96T49 567 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 CRACR2AQ9BSW2 395 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 AGPAT5Q9NUQ2 364 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 CGNQ9P2M7 1197 aaKnown RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 ZNF215Q9UL58 517 aaPredicted RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 CAPN11Q9UMQ6 739 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 COL1A2P08123 1366 aa11.1□□□□□ -0.63
APOC1-201ENST00000586638 TRIP12Q14669 1992 aaPredicted RBP11.1□□□□□ -0.63
APOC1-201ENST00000586638 FRMPD3Q5JV73 1810 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 HNRNPDLO14979 420 aaKnown RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 RARBP10826 455 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 FECHP22830 423 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 ADSSP30520 456 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 LIG4P49917 911 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 PPP2R3AQ06190 1150 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 STRN3Q13033 797 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 MYBPC2Q14324 1141 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 DGKDQ16760 1214 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 IER5Q5VY09 327 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 RNF180Q86T96 592 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 XXYLT1Q8NBI6 393 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 NEK11Q8NG66 645 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 PRPF31Q8WWY3 499 aaKnown RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 PSPC1Q8WXF1 523 aaKnown RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 JPH2Q9BR39 696 aaPredicted RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 GANQ9H2C0 597 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 XPNPEP3Q9NQH7 507 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 GCNT4Q9P109 453 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 SUCLA2Q9P2R7 463 aaPredicted RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 PHF24Q9UPV7 400 aa11.09□□□□□ -0.63
APOC1-201ENST00000586638 LUC7L2Q9Y383 392 aaKnown RBP11.09□□□□□ -0.63
APOC1-201ENST00000586638 ANK1P16157 1881 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 A0A1W2PQJ5 194 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 H3BRB1 525 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 MYL3P08590 195 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
APOC1-201ENST00000586638 ACTN1P12814 892 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 KRT13P13646 458 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 FOSL2P15408 326 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 RAG1P15918 1043 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 KCNJ6P48051 423 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 CHMP4BP1P59074 171 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 SNRPFP62306 86 aaKnown RBP11.08□□□□□ -0.64
APOC1-201ENST00000586638 DLG4P78352 724 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 BEX3Q00994 111 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 MYL7Q01449 175 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 LAMTOR4Q0VGL1 99 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 BFSP1Q12934 665 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 GRIK4Q16099 956 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 FIGNQ5HY92 759 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 E4F1Q66K89 784 aaPredicted RBP11.08□□□□□ -0.64
APOC1-201ENST00000586638 CDCA2Q69YH5 1023 aaPredicted RBP11.08□□□□□ -0.64
APOC1-201ENST00000586638 EFCAB12Q6NXP0 572 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 RAD9BQ6WBX8 426 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 TOGARAM2Q6ZUX3 1019 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 CBWD2Q8IUF1 395 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 CCAR2Q8N163 923 aaKnown RBP11.08□□□□□ -0.64
APOC1-201ENST00000586638 METTL13Q8N6R0 699 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 LINC01465Q8N7H1 131 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
APOC1-201ENST00000586638 RNPC3Q96LT9 517 aaKnown RBP11.08□□□□□ -0.64
APOC1-201ENST00000586638 NLRP4Q96MN2 994 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms