RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZFP42Q96MM3 310 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 GAD1Q99259 594 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-225ENST00000586385 RHOBTB2Q9BYZ6 727 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 ZSWIM6Q9HCJ5 1215 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 RGL1Q9NZL6 768 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 KANSL3Q9P2N6 904 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 IPPQ9Y573 584 aa13.29□□□□□ -0.28
BRCA1-225ENST00000586385 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 TSPAN1O60635 241 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 URODP06132 367 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
BRCA1-225ENST00000586385 CFHP08603 1231 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 SPATA31D3P0C874 917 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 MLH1P40692 756 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 FOXK2Q01167 660 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 DSG1Q02413 1049 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 EMC2Q15006 297 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 SPATA31D4Q6ZUB0 917 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 C4orf19Q8IY42 314 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 SLC44A3Q8N4M1 653 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 RNF149Q8NC42 400 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 OXER1Q8TDS5 423 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 SLC7A3Q8WY07 619 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 CPB2Q96IY4 423 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 FAM20AQ96MK3 541 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 RTP3Q9BQQ7 232 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 LXNQ9BS40 222 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 CHST7Q9NS84 486 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 WNT16Q9UBV4 365 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 FBXL21Q9UKT6 434 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 CLUHO75153 1309 aa13.28□□□□□ -0.28
BRCA1-225ENST00000586385 EP300Q09472 2414 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-225ENST00000586385 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 ADH1AP07327 375 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 YWHABP31946 246 aaKnown RBP13.27□□□□□ -0.29
BRCA1-225ENST00000586385 RFC5P40937 340 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 OR1G1P47890 313 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 GLUD2P49448 558 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 SCNN1GP51170 649 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 PTENP60484 403 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 EPHA7Q15375 998 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 LILRA6Q6PI73 481 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 KRT25Q7Z3Z0 450 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-225ENST00000586385 ST13P5Q8NFI4 369 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-225ENST00000586385 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 DYDC2Q96IM9 177 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-225ENST00000586385 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 NXF3Q9H4D5 531 aaKnown RBP13.27□□□□□ -0.29
BRCA1-225ENST00000586385 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 CACNA1AO00555 2505 aa13.27□□□□□ -0.29
BRCA1-225ENST00000586385 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 GLUD1P00367 558 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 ITGA4P13612 1032 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 PSMA5P28066 241 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 GBP2P32456 591 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-225ENST00000586385 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 CTTNQ14247 550 aaKnown RBP13.26□□□□□ -0.29
BRCA1-225ENST00000586385 GALNT17Q6IS24 598 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 NEK8Q86SG6 692 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-225ENST00000586385 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
BRCA1-225ENST00000586385 RABGGTAQ92696 567 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-225ENST00000586385 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 TBC1D17Q9HA65 648 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 CACNG4Q9UBN1 327 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 CA14Q9ULX7 337 aa13.26□□□□□ -0.29
BRCA1-225ENST00000586385 B4GALT5O43286 388 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 TGM5O43548 720 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 SLITRK3O94933 977 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 SRFP11831 508 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 LAMP2P13473 410 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 ARF4P18085 180 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-225ENST00000586385 RPL17P18621 184 aaKnown RBP13.25□□□□□ -0.29
BRCA1-225ENST00000586385 CYP4A11Q02928 519 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 STK3Q13188 491 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 HTR4Q13639 388 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 CAPSQ13938 189 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 CDR2LQ86X02 465 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-225ENST00000586385 PALB2Q86YC2 1186 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 GPR152Q8TDT2 470 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 RPP25Q9BUL9 199 aaKnown RBP13.25□□□□□ -0.29
BRCA1-225ENST00000586385 CSRNP2Q9H175 543 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms