RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 HACE1Q8IYU2 909 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 RNF168Q8IYW5 571 aaPredicted RBP11.79□□□□□ -0.52
MBD3-203ENST00000585903 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 RNF149Q8NC42 400 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 TNFRSF25Q93038 417 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 LPPQ93052 612 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 ACSF2Q96CM8 615 aaPredicted RBP11.79□□□□□ -0.52
MBD3-203ENST00000585903 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 FAM193BQ96PV7 902 aaPredicted RBP11.79□□□□□ -0.52
MBD3-203ENST00000585903 SH2D3AQ9BRG2 576 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 MRPL17Q9NRX2 175 aaKnown RBP11.79□□□□□ -0.52
MBD3-203ENST00000585903 PCDHA12Q9UN75 941 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
MBD3-203ENST00000585903 C2orf16Q68DN1 1984 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 C2CD4DB7Z1M9 353 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 K7ELQ4 463 aaPredicted RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 NR1I2O75469 434 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 SLITRK3O94933 977 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 HSP90AA1P07900 732 aaKnown RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 KRT2P35908 639 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 HMGN5P82970 282 aaKnown RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 CREMQ03060 361 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 DSC1Q08554 894 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 XKR9Q5GH70 373 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 OTOP3Q7RTS5 596 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 HERC2P3Q9BVR0 1158 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 VN1R3Q9BXE9 311 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 CSRNP2Q9H175 543 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 FAM86C1Q9NVL1 165 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 ORC3Q9UBD5 711 aaPredicted RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 DNAJB4Q9UDY4 337 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
MBD3-203ENST00000585903 INPP5FQ9Y2H2 1132 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 GIT1Q9Y2X7 761 aa11.78□□□□□ -0.52
MBD3-203ENST00000585903 MEIS3P2A8K0S8 358 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 PROB1E7EW31 1015 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 NRP1O14786 923 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 TSPAN1O60635 241 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 DDHD2O94830 711 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 CTDNEP1O95476 244 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 URODP06132 367 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 ADH1AP07327 375 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 CNPP09543 421 aaKnown RBP11.77□□□□□ -0.53
MBD3-203ENST00000585903 ITGA4P13612 1032 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 EPCAMP16422 314 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 ARL2P36404 184 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 CLCN5P51795 746 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 RARS2Q5T160 578 aaKnown RBP11.77□□□□□ -0.53
MBD3-203ENST00000585903 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 ERMP1Q7Z2K6 904 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 ZNF280BQ86YH2 543 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 COLGALT2Q8IYK4 626 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
MBD3-203ENST00000585903 FAM184AQ8NB25 1140 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 SMG8Q8ND04 991 aaKnown RBP11.77□□□□□ -0.53
MBD3-203ENST00000585903 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 NXPE3Q969Y0 559 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 DYDC2Q96IM9 177 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 PRIMPOLQ96LW4 560 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 RPS6KC1Q96S38 1066 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 EIF2AK1Q9BQI3 630 aaKnown RBP11.77□□□□□ -0.53
MBD3-203ENST00000585903 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 XPNPEP1Q9NQW7 623 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.53
MBD3-203ENST00000585903 RGL1Q9NZL6 768 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 IPPQ9Y573 584 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 VPS13AQ96RL7 3174 aa11.77□□□□□ -0.53
MBD3-203ENST00000585903 ARL5CA6NH57 179 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
MBD3-203ENST00000585903 B4GALT3O60512 393 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 NEMFO60524 1076 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 LARGE1O95461 756 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 BRD1O95696 1058 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 FDPSP14324 419 aaKnown RBP11.76□□□□□ -0.53
MBD3-203ENST00000585903 MUTP22033 750 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 KLRC2P26717 231 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 RARRES1P49788 294 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 DSG1Q02413 1049 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 MBTD1Q05BQ5 628 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 TRIM29Q14134 588 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 CALCRLQ16602 461 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 AMHR2Q16671 573 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 FAM187BQ17R55 369 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 STAMQ92783 540 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 MTMR9Q96QG7 549 aa11.76□□□□□ -0.53
MBD3-203ENST00000585903 GBP3Q9H0R5 595 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms