RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CSF2RAP15509 400 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 FGFR4P22455 802 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 NAMPTP43490 491 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 NPTX2P47972 431 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 DNM2P50570 870 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 PEX3P56589 373 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 PTENP60484 403 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 FKBP3Q00688 224 aaKnown RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 DMP1Q13316 513 aaPredicted RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 MXD4Q14582 209 aaPredicted RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 CDCA2Q69YH5 1023 aaPredicted RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 TTI2Q6NXR4 508 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 C16orf59Q7L2K0 433 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 EPM2AIP1Q7L775 607 aaPredicted RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 CSGALNACT2Q8N6G5 542 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 NTPCRQ9BSD7 190 aaKnown RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 FGFBP2Q9BYJ0 223 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 MRPL44Q9H9J2 332 aaKnown RBP13.86□□□□□ -0.19
VMP1-202ENST00000585847 ERVK-5Q9HDB9 667 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 IMPACTQ9P2X3 320 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 GDAQ9Y2T3 454 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
VMP1-202ENST00000585847 ADCY5O95622 1261 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 SERPINC1P01008 464 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
VMP1-202ENST00000585847 CDK11BP21127 795 aaKnown RBP13.85□□□□□ -0.19
VMP1-202ENST00000585847 ZNF75DP51815 510 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 NCKAP1LP55160 1127 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 MBTD1Q05BQ5 628 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 AMHR2Q16671 573 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 PLEKHG4Q58EX7 1191 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 ODR4Q5SWX8 454 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 ISM2Q6H9L7 571 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 KLHL10Q6JEL2 608 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 SFR1Q86XK3 245 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 ZNF507Q8TCN5 953 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 NLRP7Q8WX94 980 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 HPS3Q969F9 1004 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 TRIM44Q96DX7 344 aaPredicted RBP13.85□□□□□ -0.19
VMP1-202ENST00000585847 IFT74Q96LB3 600 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 NFKBIZQ9BYH8 718 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 CCDC113Q9H0I3 377 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 TYW1Q9NV66 732 aaKnown RBP13.85□□□□□ -0.19
VMP1-202ENST00000585847 FANCLQ9NW38 375 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 ARHGAP28Q9P2N2 729 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 LIMA1Q9UHB6 759 aaKnown RBP13.85□□□□□ -0.19
VMP1-202ENST00000585847 GINS2Q9Y248 185 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 SQORQ9Y6N5 450 aa13.85□□□□□ -0.19
VMP1-202ENST00000585847 LAMA2P24043 3122 aaKnown RBP13.85□□□□□ -0.19
VMP1-202ENST00000585847 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 KIAA0391O15091 583 aaKnown RBP13.84□□□□□ -0.19
VMP1-202ENST00000585847 SLC16A3O15427 465 aaKnown RBP13.84□□□□□ -0.19
VMP1-202ENST00000585847 NRDCO43847 1150 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 PPP1R37O75864 691 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 EIF4BP23588 611 aaKnown RBP13.84□□□□□ -0.19
VMP1-202ENST00000585847 CD52P31358 61 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 GSDMDP57764 484 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 CDC42EP1Q00587 391 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 ENPEPQ07075 957 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 KNOP1Q1ED39 458 aaKnown RBP13.84□□□□□ -0.19
VMP1-202ENST00000585847 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 TSHZ1Q6ZSZ6 1077 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 SRGAP1Q7Z6B7 1085 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
VMP1-202ENST00000585847 TMEM161BQ8NDZ6 487 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 DBF4BQ8NFT6 615 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 LINC01599Q8WXQ3 324 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 MKNK1Q9BUB5 465 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 GCOM2Q9BZD3 368 aaPredicted RBP13.84□□□□□ -0.19
VMP1-202ENST00000585847 ZHX3Q9H4I2 956 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 SLC39A2Q9NP94 309 aa13.84□□□□□ -0.19
VMP1-202ENST00000585847 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 SLC16A4O15374 487 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 MGEA5O60502 916 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 ACRP10323 421 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 NMT1P30419 496 aaKnown RBP13.83□□□□□ -0.2
VMP1-202ENST00000585847 RFC2P35250 354 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 CASP5P51878 434 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 MARSP56192 900 aaKnown RBP13.83□□□□□ -0.2
VMP1-202ENST00000585847 FANCCQ00597 558 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 TFDP1Q14186 410 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 DSC3Q14574 896 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 SHHQ15465 462 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 ZNF720Q7Z2F6 126 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 DEFB128Q7Z7B8 93 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 RTN4RL1Q86UN2 441 aaPredicted RBP13.83□□□□□ -0.2
VMP1-202ENST00000585847 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 SMYD4Q8IYR2 804 aaPredicted RBP13.83□□□□□ -0.2
VMP1-202ENST00000585847 SCFD1Q8WVM8 642 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 FZD8Q9H461 694 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 METTL14Q9HCE5 456 aaKnown RBP13.83□□□□□ -0.2
VMP1-202ENST00000585847 IL23AQ9NPF7 189 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 PADI3Q9ULW8 664 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms