RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 SPRED2Q7Z698 418 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 ZNF598Q86UK7 904 aaKnown RBP23.58■■□□□ 1.37
RETREG3-202ENST00000585726 ABI1Q8IZP0 508 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 FIBCD1Q8N539 461 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 HELQQ8TDG4 1101 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 PGBD4Q96DM1 585 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 C7orf25Q9BPX7 421 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 MRPL4Q9BYD3 311 aaKnown RBP23.58■■□□□ 1.37
RETREG3-202ENST00000585726 MRPL44Q9H9J2 332 aaKnown RBP23.58■■□□□ 1.37
RETREG3-202ENST00000585726 USP25Q9UHP3 1055 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 MTUS1Q9ULD2 1270 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 HES2Q9Y543 173 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 IPPQ9Y573 584 aa23.58■■□□□ 1.37
RETREG3-202ENST00000585726 LAMA2P24043 3122 aaKnown RBP23.58■■□□□ 1.37
RETREG3-202ENST00000585726 LAMA3Q16787 3333 aa23.58■■□□□ 1.36
RETREG3-202ENST00000585726 LINC01553A4QN01 128 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 ZNF623O75123 536 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 ZNF202O95125 648 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 CUL4BQ13620 913 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 ZC2HC1CQ53FD0 456 aaPredicted RBP23.57■■□□□ 1.36
RETREG3-202ENST00000585726 DEFB123Q8N688 67 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 SMG8Q8ND04 991 aaKnown RBP23.57■■□□□ 1.36
RETREG3-202ENST00000585726 CNNM3Q8NE01 707 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 BICD1Q96G01 975 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 FIZ1Q96SL8 496 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 ADPGKQ9BRR6 497 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 SEMA6BQ9H3T3 888 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 RC3H2Q9HBD1 1191 aaKnown RBP23.57■■□□□ 1.36
RETREG3-202ENST00000585726 RNF19AQ9NV58 838 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 MYH11P35749 1972 aa23.57■■□□□ 1.36
RETREG3-202ENST00000585726 HOXA2O43364 376 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 GADD45BO75293 160 aaPredicted RBP23.56■■□□□ 1.36
RETREG3-202ENST00000585726 ITGA4P13612 1032 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 COASYQ13057 564 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 CLLU1OSQ5K130 101 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 GPR153Q6NV75 609 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 ZBTB33Q86T24 672 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 SP7Q8TDD2 431 aaPredicted RBP23.56■■□□□ 1.36
RETREG3-202ENST00000585726 ACO2Q99798 780 aaKnown RBP23.56■■□□□ 1.36
RETREG3-202ENST00000585726 TCHPQ9BT92 498 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 RNF39Q9H2S5 420 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 NXF3Q9H4D5 531 aaKnown RBP23.56■■□□□ 1.36
RETREG3-202ENST00000585726 SEL1LQ9UBV2 794 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 TBX20Q9UMR3 447 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 INPP5FQ9Y2H2 1132 aa23.56■■□□□ 1.36
RETREG3-202ENST00000585726 FRMD3A2A2Y4 597 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 KRBA2Q6ZNG9 492 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 ZNF720Q7Z2F6 126 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 MRPL10Q7Z7H8 261 aaKnown RBP23.55■■□□□ 1.36
RETREG3-202ENST00000585726 CMTR2Q8IYT2 770 aaKnown RBP23.55■■□□□ 1.36
RETREG3-202ENST00000585726 ARNTL2Q8WYA1 636 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 HPS3Q969F9 1004 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 CASD1Q96PB1 797 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 TMEM117Q9H0C3 514 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 TNFSF13BQ9Y275 285 aa23.55■■□□□ 1.36
RETREG3-202ENST00000585726 TMEM265A0A087WTH1 108 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 GCNT3O95395 438 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 HARSP12081 509 aaKnown RBP23.54■■□□□ 1.36
RETREG3-202ENST00000585726 AKAP5P24588 427 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 MATR3P43243 847 aaKnown RBP eCLIP23.54■■□□□ 1.36
RETREG3-202ENST00000585726 SPOUT1Q5T280 376 aaKnown RBP23.54■■□□□ 1.36
RETREG3-202ENST00000585726 AGMOQ6ZNB7 445 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 HACE1Q8IYU2 909 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 SLC17A8Q8NDX2 589 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 ZBTB45Q96K62 511 aaPredicted RBP23.54■■□□□ 1.36
RETREG3-202ENST00000585726 C17orf80Q9BSJ5 609 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 FGFBP2Q9BYJ0 223 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 ANKFY1Q9P2R3 1169 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 PARP2Q9UGN5 583 aa23.54■■□□□ 1.36
RETREG3-202ENST00000585726 MRPL42Q9Y6G3 142 aaKnown RBP23.54■■□□□ 1.36
RETREG3-202ENST00000585726 PRR29P0C7W0 189 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 MYBP10242 640 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 GTF2BQ00403 316 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 GRIN2CQ14957 1233 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 ZNF568Q3ZCX4 644 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 GLB1LQ6UWU2 654 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 UNC13DQ70J99 1090 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 FMR1NBQ8N0W7 255 aaPredicted RBP23.53■■□□□ 1.36
RETREG3-202ENST00000585726 TGS1Q96RS0 853 aaKnown RBP23.53■■□□□ 1.36
RETREG3-202ENST00000585726 RSAD1Q9HA92 442 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 HCSTQ9UBK5 93 aa23.53■■□□□ 1.36
RETREG3-202ENST00000585726 PRPF40AO75400 957 aaKnown RBP23.52■■□□□ 1.36
RETREG3-202ENST00000585726 OFD1O75665 1012 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 LIG4P49917 911 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 CASP5P51878 434 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 FAM160A1Q05DH4 1040 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 DCAF4L1Q3SXM0 396 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 CNNM4Q6P4Q7 775 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 APBB1IPQ7Z5R6 666 aaPredicted RBP23.52■■□□□ 1.36
RETREG3-202ENST00000585726 TMEM87AQ8NBN3 555 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 PRDM12Q9H4Q4 367 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 OLFML3Q9NRN5 406 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 TYW1Q9NV66 732 aaKnown RBP23.52■■□□□ 1.36
RETREG3-202ENST00000585726 SNTG2Q9NY99 539 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 KLK14Q9P0G3 267 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 GDAQ9Y2T3 454 aa23.52■■□□□ 1.36
RETREG3-202ENST00000585726 COL4A6Q14031 1691 aa23.51■■□□□ 1.35
RETREG3-202ENST00000585726 RFXAPO00287 272 aa23.51■■□□□ 1.35
RETREG3-202ENST00000585726 HNRNPDLO14979 420 aaKnown RBP23.51■■□□□ 1.35
RETREG3-202ENST00000585726 GTPBP6O43824 516 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms