RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 MTMR1Q13613 665 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 HIF1AQ16665 826 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 LETM2Q2VYF4 491 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 HSDL1Q3SXM5 330 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 KCNV1Q6PIU1 500 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 TLK2Q86UE8 772 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 NLRX1Q86UT6 975 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 PLA2G4DQ86XP0 818 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 FBF1Q8TES7 1133 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
CDH8-213ENST00000584966 KAT2BQ92831 832 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 SLC5A5Q92911 643 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 MTMR9Q96QG7 549 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 UIMC1Q96RL1 719 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 TMEM60Q9H2L4 133 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 XPNPEP3Q9NQH7 507 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 FAM13BQ9NYF5 915 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 MRVI1Q9Y6F6 885 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 RANBP2P49792 3224 aaKnown RBP6.37□□□□□ -1.39
CDH8-213ENST00000584966 TET1Q8NFU7 2136 aa6.37□□□□□ -1.39
CDH8-213ENST00000584966 LTBP2Q14767 1821 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 IGKV6D-21A0A0A0MT36 114 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 CCDC85CA6NKD9 419 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 IPO5O00410 1097 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 DNM1LO00429 736 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 CCNT1O60563 726 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 GH1P01241 217 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 RPLP1P05386 114 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 ASGR1P07306 291 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 MMP3P08254 477 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 C6orf222P0C671 652 aaPredicted RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 CAPN2P17655 700 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 PDCP20941 246 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 ERCC5P28715 1186 aaPredicted RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 ZNF76P36508 570 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 TRAPPC10P48553 1259 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 RGS19P49795 217 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 SOX10P56693 466 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 SPIRE1Q08AE8 756 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 ORC1Q13415 861 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 NEDD9Q14511 834 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 SAFBQ15424 915 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDH8-213ENST00000584966 ZNF174Q15697 407 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 KCNA10Q16322 511 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 IL17AQ16552 155 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 FSCN1Q16658 493 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 GNPTABQ3T906 1256 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 PRR16Q569H4 304 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 FAM173BQ6P4H8 233 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 METTL7BQ6UX53 244 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 ABHD15Q6UXT9 468 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 FERMT3Q86UX7 667 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 DHX37Q8IY37 1157 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 ABI1Q8IZP0 508 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 ARMC10Q8N2F6 343 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 SLC43A3Q8NBI5 491 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 OR6J1Q8NGC5 347 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 PPTC7Q8NI37 304 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 AFG1LQ8WV93 481 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 SREK1Q8WXA9 508 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 CDHR1Q96JP9 859 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 PCYT2Q99447 389 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 GPR20Q99678 358 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 C16orf70Q9BSU1 422 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 BRMS1Q9HCU9 246 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 METTL5Q9NRN9 209 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 VTI1BQ9UEU0 232 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 DDX25Q9UHL0 483 aaKnown RBP6.36□□□□□ -1.39
CDH8-213ENST00000584966 VAV3Q9UKW4 847 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 KIF3AQ9Y496 699 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 PCDHB6Q9Y5E3 794 aa6.36□□□□□ -1.39
CDH8-213ENST00000584966 HMX2A2RU54 273 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 VPS37CA5D8V6 355 aaPredicted RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 A6NHS1 94 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 H3BQV1 296 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 HAS3O00219 553 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 EIF1AYO14602 144 aaKnown RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 TBX3O15119 743 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 PPFIA4O75335 1185 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 STBD1O95210 358 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 MAP3K6O95382 1288 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 ZSCAN22P10073 491 aaPredicted RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 GCFC2P16383 781 aaKnown RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 TARSP26639 723 aaKnown RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 GRNP28799 593 aaKnown RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 CDK7P50613 346 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 ACLYP53396 1101 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 GPLD1P80108 840 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 PURAQ00577 322 aaKnown RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 FANCCQ00597 558 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 SETQ01105 290 aaPredicted RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 BECN1Q14457 450 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 PTPAQ15257 358 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 NAALADL2Q58DX5 795 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 TTC38Q5R3I4 469 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 GDF6Q6KF10 455 aaPredicted RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 RNF180Q86T96 592 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms