RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ZNF174Q15697 407 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 KANK3Q6NY19 840 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 NECTIN4Q96NY8 510 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 TMEM175Q9BSA9 504 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 CSRNP2Q9H175 543 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 RNF39Q9H2S5 420 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 UBN1Q9NPG3 1134 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 GPRC5CQ9NQ84 441 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 NR2E1Q9Y466 385 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 ZDBF2Q9HCK1 2354 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 ZNF318Q5VUA4 2279 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 B4GALT5O43286 388 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 MTHFRP42898 656 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 OR1G1P47890 313 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 CABP7Q86V35 215 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 CDR2LQ86X02 465 aaPredicted RBP22.68■■□□□ 1.22
TOP3A-219ENST00000584887 RIPOR3Q96MK2 946 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 EMILIN2Q9BXX0 1053 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 NXF3Q9H4D5 531 aaKnown RBP22.68■■□□□ 1.22
TOP3A-219ENST00000584887 IRAK3Q9Y616 596 aa22.68■■□□□ 1.22
TOP3A-219ENST00000584887 PIEZO1Q92508 2521 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 ARL5CA6NH57 179 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 C2CD2LO14523 706 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 NRP1O14786 923 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 ARF4P18085 180 aaPredicted RBP22.67■■□□□ 1.22
TOP3A-219ENST00000584887 KLRC2P26717 231 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 SCNN1GP51170 649 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 PTPN21Q16825 1174 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 IFNLR1Q8IU57 520 aaPredicted RBP22.67■■□□□ 1.22
TOP3A-219ENST00000584887 HACE1Q8IYU2 909 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 SLC22A17Q8WUG5 538 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 FBXL18Q96ME1 805 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 ZFP42Q96MM3 310 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 TUFT1Q9NNX1 390 aa22.67■■□□□ 1.22
TOP3A-219ENST00000584887 C2CD4DB7Z1M9 353 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 MED24O75448 989 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 NPTXRO95502 500 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 URODP06132 367 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 OR52Z1P0C646 297 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 SPATA31C1P0DKV0 1188 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 HOXD11P31277 338 aaPredicted RBP22.66■■□□□ 1.22
TOP3A-219ENST00000584887 POU5F1BQ06416 359 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 AMHR2Q16671 573 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 POTEGQ6S5H5 508 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 TMC5Q6UXY8 1006 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 PPFIBP1Q86W92 1011 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 SUGP1Q8IWZ8 645 aaKnown RBP22.66■■□□□ 1.22
TOP3A-219ENST00000584887 FAM184AQ8NB25 1140 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 ERMNQ8TAM6 284 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 MRPL17Q9NRX2 175 aaKnown RBP22.66■■□□□ 1.22
TOP3A-219ENST00000584887 STK39Q9UEW8 545 aa22.66■■□□□ 1.22
TOP3A-219ENST00000584887 DBR1Q9UK59 544 aaKnown RBP22.66■■□□□ 1.22
TOP3A-219ENST00000584887 XRCC6P12956 609 aaKnown RBP eCLIP22.65■■□□□ 1.22
TOP3A-219ENST00000584887 SIGLEC14Q08ET2 396 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 TMEM132AQ24JP5 1023 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 TTC38Q5R3I4 469 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 ATAT1Q5SQI0 421 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 CATSPER3Q86XQ3 398 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 COLGALT2Q8IYK4 626 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 MCPH1Q8NEM0 835 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 KLHL5Q96PQ7 755 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 LLPHQ9BRT6 129 aaKnown RBP22.65■■□□□ 1.22
TOP3A-219ENST00000584887 MARCH5Q9NX47 278 aa22.65■■□□□ 1.22
TOP3A-219ENST00000584887 CNPP09543 421 aaKnown RBP22.64■■□□□ 1.21
TOP3A-219ENST00000584887 LIG1P18858 919 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 AKAP5P24588 427 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 KIAA1841Q6NSI8 718 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 SLC27A1Q6PCB7 646 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 ZBTB8OSQ8IWT0 167 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 TDRD5Q8NAT2 981 aaKnown RBP22.64■■□□□ 1.21
TOP3A-219ENST00000584887 NACC1Q96RE7 527 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 HERC2P3Q9BVR0 1158 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 NFKBIZQ9BYH8 718 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 FOXP1Q9H334 677 aaPredicted RBP22.64■■□□□ 1.21
TOP3A-219ENST00000584887 MIOSQ9NXC5 875 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 KLK14Q9P0G3 267 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 PARP2Q9UGN5 583 aa22.64■■□□□ 1.21
TOP3A-219ENST00000584887 ARHGEF35A5YM69 484 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 NR1I2O75469 434 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 SOD2P04179 222 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 HMGN5P82970 282 aaKnown RBP22.63■■□□□ 1.21
TOP3A-219ENST00000584887 BMP8AQ7Z5Y6 402 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 KREMEN2Q8NCW0 462 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 FEZF2Q8TBJ5 459 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 ZSCAN31Q96LW9 406 aaPredicted RBP22.63■■□□□ 1.21
TOP3A-219ENST00000584887 POLR3CQ9BUI4 534 aaPredicted RBP22.63■■□□□ 1.21
TOP3A-219ENST00000584887 KCNH6Q9H252 994 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 SFXN1Q9H9B4 322 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 GIT1Q9Y2X7 761 aa22.63■■□□□ 1.21
TOP3A-219ENST00000584887 F8W810 466 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 INPPL1O15357 1258 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 GLUD2P49448 558 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 RBM25P49756 843 aaKnown RBP22.62■■□□□ 1.21
TOP3A-219ENST00000584887 DSC1Q08554 894 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 PADI6Q6TGC4 694 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 TAS1R1Q7RTX1 841 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 FBXL6Q8N531 539 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 FBXO18Q8NFZ0 1043 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 RPS6KC1Q96S38 1066 aa22.62■■□□□ 1.21
TOP3A-219ENST00000584887 SH2B1Q9NRF2 756 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms