RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TNKSO95271 1327 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 A0A1W2PR48 441 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 A0A1W2PRX2 142 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 CYR61O00622 381 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 PLSCR1O15162 318 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 S100BP04271 92 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 GAAP10253 952 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 VCAM1P19320 739 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 KIR2DL3P43628 341 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 MTNR1BP49286 362 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 HMGA2P52926 109 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 NRG3P56975 720 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 DGCR2P98153 550 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 MEF2AQ02078 507 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 PPARAQ07869 468 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 RIN1Q13671 783 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 SAFB2Q14151 953 aaKnown RBP eCLIP5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 SPIDRQ14159 915 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 D2HGDHQ8N465 521 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 TGFBRAP1Q8WUH2 860 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 RABGGTAQ92696 567 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 FATE1Q969F0 183 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 ZNF503Q96F45 646 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 RPL10LQ96L21 214 aaKnown RBP5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 MRIQ9BWK5 157 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 CCDC8Q9H0W5 538 aaPredicted RBP5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 MKS1Q9NXB0 559 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 EDARQ9UNE0 448 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 CDY2AQ9Y6F7 541 aa5.3□□□□□ -1.56
PPP4R1-227ENST00000583988 KLHL33A6NCF5 533 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 CAPN14A8MX76 684 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 FZD9O00144 591 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 LY86O95711 162 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 MYBL2P10244 700 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 CCND1P24385 295 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 RECQLP46063 649 aaPredicted RBP5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 KLF10Q13118 480 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 TCIRG1Q13488 830 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 GAGE13Q4V321 117 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 MIIPQ5JXC2 388 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 ZBTB46Q86UZ6 589 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 GLB1L2Q8IW92 636 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 UNC5BQ8IZJ1 945 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 PLEKHG4BQ96PX9 1271 aa5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 CCM2LQ9NUG4 571 aaPredicted RBP5.29□□□□□ -1.56
PPP4R1-227ENST00000583988 C1SP09871 688 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 VSIG10L2P0DP72 767 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 AGXTP21549 392 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 ACRV1P26436 265 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 BPIFB4P59827 614 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 ADAM8P78325 824 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 PTH1RQ03431 593 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 MCL1Q07820 350 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 MUM1Q2TAK8 710 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 TMEM240Q5SV17 173 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 ODR4Q5SWX8 454 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 FAM180AQ6UWF9 173 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 TAS1R1Q7RTX1 841 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 ANKRD53Q8N9V6 530 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 IL17DQ8TAD2 202 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 UIMC1Q96RL1 719 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 C14orf93Q9H972 538 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 DNAJC28Q9NX36 388 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 DPP7Q9UHL4 492 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 ING1Q9UK53 422 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 GPR45Q9Y5Y3 372 aa5.28□□□□□ -1.56
PPP4R1-227ENST00000583988 MTSS1O43312 755 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 TOX4O94842 621 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 ZNF202O95125 648 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 SNUPNO95149 360 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 JUNP05412 331 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 IARSP41252 1262 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 MGAT5Q09328 741 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 UBE3CQ15386 1083 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 LSM12Q3MHD2 195 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 C19orf54Q5BKX5 351 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 TOR2AQ5JU69 321 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 IGFL4Q6B9Z1 124 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 ADGRE4PQ86SQ3 457 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 PIK3C3Q8NEB9 887 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 TSPEARQ8WU66 669 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 QRSL1Q9H0R6 528 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 PCED1AQ9H1Q7 454 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 IFT122Q9HBG6 1241 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 HECAQ9UBI9 543 aaPredicted RBP5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 SH3BP1Q9Y3L3 701 aa5.27□□□□□ -1.57
PPP4R1-227ENST00000583988 PHF2O75151 1096 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 RFPL1O75677 317 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 U2AF1L5P0DN76 240 aaPredicted RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 CDK17Q00537 523 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 U2AF1Q01081 240 aaKnown RBP eCLIP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 SRSF2Q01130 221 aaKnown RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 CRHR2Q13324 411 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 ABCB5Q2M3G0 1257 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms