RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PFKMP08237 780 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 FGFR4P22455 802 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 CCNE1P24864 410 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 ERCC5P28715 1186 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 CD52P31358 61 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 HOXD13P35453 343 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 LRRC63Q05C16 580 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 PAK1Q13153 545 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 NFIL3Q16649 462 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 PLEKHG4Q58EX7 1191 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 ATF7IP2Q5U623 682 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 TMEM174Q8WUU8 243 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 SEPT8Q92599 483 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 SCLYQ96I15 445 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 TSG101Q99816 390 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 ADPGKQ9BRR6 497 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 TARS2Q9BW92 718 aaKnown RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 FTHL17Q9BXU8 183 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 TRAF3IP3Q9Y228 551 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 STYXL1Q9Y6J8 313 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 GOLGA6L3A6NEY3 463 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
CDRT1-207ENST00000583965 B4GALT5O43286 388 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 TGFB1I1O43294 461 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 EDN1P05305 212 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-207ENST00000583965 GARTP22102 1010 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 PROZP22891 400 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 HOXA11P31270 313 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-207ENST00000583965 PPIGQ13427 754 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDRT1-207ENST00000583965 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 GPNMBQ14956 572 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 EDRF1Q3B7T1 1238 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 DCAF4L1Q3SXM0 396 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 SLC27A1Q6PCB7 646 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 MPZL3Q6UWV2 235 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 NELFBQ8WX92 580 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 P2RX5Q93086 422 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 OSBPL7Q9BZF2 842 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 PDZD7Q9H5P4 517 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 PTPRHQ9HD43 1115 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 CTNND2Q9UQB3 1225 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 PIN4Q9Y237 131 aaKnown RBP12.76□□□□□ -0.37
CDRT1-207ENST00000583965 FNDC1Q4ZHG4 1894 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-207ENST00000583965 PTPRSQ13332 1948 aa12.76□□□□□ -0.37
CDRT1-207ENST00000583965 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 CLDN3O15551 220 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 ITGB8P26012 769 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 RPL13P26373 211 aaKnown RBP12.75□□□□□ -0.37
CDRT1-207ENST00000583965 MCL1Q07820 350 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 DSC3Q14574 896 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDRT1-207ENST00000583965 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 KLHL10Q6JEL2 608 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 ARMCX5Q6P1M9 558 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 SLC39A4Q6P5W5 647 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 CNKSR3Q6P9H4 555 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 GAS2L3Q86XJ1 694 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 SLC9A9Q8IVB4 645 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 POMGNT1Q8WZA1 660 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 CPB2Q96IY4 423 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 DNAJC25Q9H1X3 360 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 TMX1Q9H3N1 280 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 SEMA6BQ9H3T3 888 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 AGPAT3Q9NRZ7 376 aa12.75□□□□□ -0.37
CDRT1-207ENST00000583965 A0A0B4J269 797 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 ANKRD63C9JTQ0 380 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 ABLIM1O14639 778 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 EFCAB14O75071 495 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
CDRT1-207ENST00000583965 MCF2P10911 925 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 SKIP12755 728 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 CSF2RAP15509 400 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDRT1-207ENST00000583965 RGS19P49795 217 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 RAB27AP51159 221 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 FPGSQ05932 587 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 KYAT1Q16773 422 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 ZNF568Q3ZCX4 644 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 ANKRD40Q6AI12 368 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 TWF2Q6IBS0 349 aaKnown RBP12.74□□□□□ -0.37
CDRT1-207ENST00000583965 TTI2Q6NXR4 508 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 C11orf57Q6ZUT1 292 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-207ENST00000583965 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 DBF4BQ8NFT6 615 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 BADQ92934 168 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 TCHPQ9BT92 498 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms