RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PEX3P56589 373 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 ZBTB16Q05516 673 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 CFAP157Q5JU67 520 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 NFRKBQ6P4R8 1299 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 CCDC62Q6P9F0 684 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.26□□□□□ -1.41
RTTN-209ENST00000583043 CCDC127Q96BQ5 260 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 ADAM22Q9P0K1 906 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 USH1CQ9Y6N9 552 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 C5P01031 1676 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 NCANO14594 1321 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 EMSYQ7Z589 1322 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 A0A087X0B3 334 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 DENND3A2RUS2 1198 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 M0QZ92 97 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 MCF2LO15068 1137 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 ONECUT3O60422 494 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 LMNAP02545 664 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 KRT15P19012 456 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PON1P27169 355 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 HOXA13P31271 388 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 PIGHQ14442 188 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 IER5Q5VY09 327 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 MIGA2Q7L4E1 593 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 EPN3Q9H201 632 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 ATRNL1Q5VV63 1379 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 NHSL1Q5SYE7 1610 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 IQANK1A0A1B0GTG1 560 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TGFB3P10600 412 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 KPNA2P52292 529 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 ARL4CP56559 192 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 AMPD2Q01433 879 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ZNF667Q5HYK9 610 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 LMNTD2Q8IXW0 634 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 RPUSD2Q8IZ73 545 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 PDIK1LQ8N165 341 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TSPAN18Q96SJ8 248 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 PRM3Q9NNZ6 103 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ARHGAP20Q9P2F6 1191 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ZNF148Q9UQR1 794 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ATXN2Q99700 1313 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 M0R2N6 131 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TLR3O15455 904 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 DCTN3O75935 186 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 FTLP02792 175 aaPredicted RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 NR3C2P08235 984 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 DLATP10515 647 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 PLA2G4AP47712 749 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 SKOR1P84550 965 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 POU5F1Q01860 360 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 SGSM1Q2NKQ1 1148 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 C3orf67Q6ZVT6 689 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TADA2BQ86TJ2 420 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 VSIG1Q86XK7 387 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 CCDC13Q8IYE1 715 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 SCYL3Q8IZE3 742 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 SPICE1Q8N0Z3 855 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 RDH13Q8NBN7 331 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 PSMB7Q99436 277 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ERP44Q9BS26 406 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 RPF1Q9H9Y2 349 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 GJA3Q9Y6H8 435 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 NFASCO94856 1347 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TJP1Q07157 1748 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ECE1P42892 770 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TXNRD3Q86VQ6 643 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 NT5DC4Q86YG4 428 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ZNF280CQ8ND82 737 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 AENQ8WTP8 325 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 DNAJC19Q96DA6 116 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 DPH5Q9H2P9 285 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ANKZF1Q9H8Y5 726 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 FGFR1OP2Q9NVK5 253 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 WHRNQ9P202 907 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ZMYM2Q9UBW7 1377 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 CLRN2A0PK11 232 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 FRMD3A2A2Y4 597 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 CLDN3O15551 220 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TSHRP16473 764 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 MDH1P40925 334 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 PLTPP55058 493 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 HNRNPH2P55795 449 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 CDR2Q01850 454 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 NPY5RQ15761 445 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 DUOXA2Q1HG44 320 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 EARS2Q5JPH6 523 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 RSPH3Q86UC2 560 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 ERICH1Q86X53 443 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 SMC1BQ8NDV3 1235 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 SLC35C1Q96A29 364 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 GDF3Q9NR23 364 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 TOPORSQ9NS56 1045 aaPredicted RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 PPP1R9AQ9ULJ8 1098 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 MED24O75448 989 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 NAMPTP43490 491 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 CLK2P49760 499 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms