RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 AFF1P51825 1210 aaKnown RBP16.1■□□□□ 0.17
ITGB4-208ENST00000582629 POU5F1BQ06416 359 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 ME3Q16798 604 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 KANK3Q6NY19 840 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 NOTUMQ6P988 496 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
ITGB4-208ENST00000582629 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 GTF3C6Q969F1 213 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 HSD17B14Q9BPX1 270 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 MRPL17Q9NRX2 175 aaKnown RBP16.1■□□□□ 0.17
ITGB4-208ENST00000582629 ANKEF1Q9NU02 776 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 MARCH5Q9NX47 278 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 SSX2IPQ9Y2D8 614 aa16.1■□□□□ 0.17
ITGB4-208ENST00000582629 C2orf16Q68DN1 1984 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 INO80B-WBP1J3KQ70 363 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 BRD1O95696 1058 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 SOD2P04179 222 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
ITGB4-208ENST00000582629 URODP06132 367 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 NEFLP07196 543 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 NUBP1P53384 320 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 MBTD1Q05BQ5 628 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 TMC5Q6UXY8 1006 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 CCDC149Q6ZUS6 474 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 GPR149Q86SP6 731 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 COLGALT2Q8IYK4 626 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 ASAP3Q8TDY4 903 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
ITGB4-208ENST00000582629 GAD1Q99259 594 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 HERC2P3Q9BVR0 1158 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 EIF2AQ9BY44 585 aaKnown RBP16.09■□□□□ 0.17
ITGB4-208ENST00000582629 NFKBIZQ9BYH8 718 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 IRF2BPLQ9H1B7 796 aa16.09■□□□□ 0.17
ITGB4-208ENST00000582629 BTBD18B2RXH4 712 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 NEMFO60524 1076 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 LARGE1O95461 756 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 ASGR2P07307 311 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 ARL2P36404 184 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 MLH1P40692 756 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 OR1G1P47890 313 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 CAPSQ13938 189 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 HACE1Q8IYU2 909 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.16
ITGB4-208ENST00000582629 ACSF2Q96CM8 615 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-208ENST00000582629 CPB2Q96IY4 423 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 TRIM6Q9C030 488 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-208ENST00000582629 CSRNP2Q9H175 543 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 TTC12Q9H892 705 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-208ENST00000582629 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 GIT1Q9Y2X7 761 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-208ENST00000582629 CACNA1HO95180 2353 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 PLXNA3P51805 1871 aa16.08■□□□□ 0.16
ITGB4-208ENST00000582629 ARL5CA6NH57 179 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 NR1I2O75469 434 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 PDGFBP01127 241 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-208ENST00000582629 GLRA2P23416 452 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 TXKP42681 527 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 RARRES1P49788 294 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 DSC1Q08554 894 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 TRIM29Q14134 588 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 AMHR2Q16671 573 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 ELMSAN1Q6PJG2 1045 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 C15orf39Q6ZRI6 1047 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 OTOP3Q7RTS5 596 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 DIS3L2Q8IYB7 885 aaKnown RBP16.07■□□□□ 0.16
ITGB4-208ENST00000582629 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-208ENST00000582629 RPS6KC1Q96S38 1066 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 PHOX2BQ99453 314 aa16.07■□□□□ 0.16
ITGB4-208ENST00000582629 ZMYM2Q9UBW7 1377 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 C2CD2LO14523 706 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 ADH1AP07327 375 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
ITGB4-208ENST00000582629 ARF4P18085 180 aaPredicted RBP16.06■□□□□ 0.16
ITGB4-208ENST00000582629 GLUD2P49448 558 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 SCNN1GP51170 649 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 RNF168Q8IYW5 571 aaPredicted RBP16.06■□□□□ 0.16
ITGB4-208ENST00000582629 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 APOL6Q9BWW8 343 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 POLR3FQ9H1D9 316 aaPredicted RBP16.06■□□□□ 0.16
ITGB4-208ENST00000582629 SMOC2Q9H3U7 446 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 MAN1C1Q9NR34 630 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 MIOSQ9NXC5 875 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 HES2Q9Y543 173 aa16.06■□□□□ 0.16
ITGB4-208ENST00000582629 MTCL1Q9Y4B5 1905 aaKnown RBP16.06■□□□□ 0.16
ITGB4-208ENST00000582629 TEX28O15482 410 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 JAK2O60674 1132 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
ITGB4-208ENST00000582629 EFEMP2O95967 443 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 GLUD1P00367 558 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 DSG1Q02413 1049 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 KIAA0319Q5VV43 1072 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 FEZF2Q8TBJ5 459 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 PIGOQ8TEQ8 1089 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 ZFP42Q96MM3 310 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 COLEC11Q9BWP8 271 aa16.05■□□□□ 0.16
ITGB4-208ENST00000582629 NXF3Q9H4D5 531 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms