RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 SPECC1LQ69YQ0 1117 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 TRIM50Q86XT4 487 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-204ENST00000581979 C17orf75Q9HAS0 396 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 C17orf102A2RUQ5 167 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 GNA14O95837 355 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 SMIM10L2AP0DMW4 78 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 SMIM10L2BP0DMW5 78 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 NR2F2P24468 414 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 RPL13P26373 211 aaKnown RBP13.77□□□□□ -0.21
SRSF1-204ENST00000581979 RFC5P40937 340 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 SLC26A2P50443 739 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 NCKAP1LP55160 1127 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 KCNA1Q09470 495 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 CNKSR3Q6P9H4 555 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 ZSCAN30Q86W11 494 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 SYCP3Q8IZU3 236 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 POLR3FQ9H1D9 316 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-204ENST00000581979 TMEM206Q9H813 350 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 XPNPEP1Q9NQW7 623 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 ZKSCAN5Q9Y2L8 839 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 PPME1Q9Y570 386 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 ZMYM2Q9UBW7 1377 aa13.77□□□□□ -0.21
SRSF1-204ENST00000581979 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 SLC16A4O15374 487 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 PPP1R37O75864 691 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 NR3C1P04150 777 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 MSNP26038 577 aaKnown RBP13.76□□□□□ -0.21
SRSF1-204ENST00000581979 UBXN1Q04323 297 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 MBTPS1Q14703 1052 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 PPP2R2DQ66LE6 453 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 HS2ST1Q7LGA3 356 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 HAUS6Q7Z4H7 955 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
SRSF1-204ENST00000581979 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 STRA6Q9BX79 667 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ST6GALNAC4Q9H4F1 302 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 DHX33Q9H6R0 707 aaKnown RBP13.76□□□□□ -0.21
SRSF1-204ENST00000581979 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ZNF215Q9UL58 517 aaPredicted RBP13.76□□□□□ -0.21
SRSF1-204ENST00000581979 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 CLIC2O15247 247 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 NPTX2P47972 431 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
SRSF1-204ENST00000581979 TARBP2Q15633 366 aaKnown RBP13.76□□□□□ -0.21
SRSF1-204ENST00000581979 MAN2A1Q16706 1144 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 TMEM143Q96AN5 459 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 KCNF1Q9H3M0 494 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 KCNG1Q9UIX4 513 aa13.76□□□□□ -0.21
SRSF1-204ENST00000581979 VCANP13611 3396 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 ESPNB1AK53 854 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 TREHO43280 583 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 HBP1O60381 514 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 EFCAB14O75071 495 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 CAND2O75155 1236 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 CA3P07451 260 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 GNAT1P11488 350 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 THPOP40225 353 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 PBX1P40424 430 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 DNM2P50570 870 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 ADAM17P78536 824 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 GTF2BQ00403 316 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 ARID5BQ14865 1188 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 TCTN1Q2MV58 587 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 VWA3BQ502W6 1294 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 FKBP15Q5T1M5 1219 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 LRRC8AQ8IWT6 810 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 EXOC8Q8IYI6 725 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 CACTINQ8WUQ7 758 aaKnown RBP13.75□□□□□ -0.21
SRSF1-204ENST00000581979 BSNDQ8WZ55 320 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 HVCN1Q96D96 273 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 EXOC7Q9UPT5 735 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 PTPRSQ13332 1948 aa13.75□□□□□ -0.21
SRSF1-204ENST00000581979 ITIH6Q6UXX5 1313 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 H0YCG3 227 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRSF1-204ENST00000581979 KCNJ6P48051 423 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 PPP2R5AQ15172 486 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 NFIL3Q16649 462 aa13.74□□□□□ -0.21
SRSF1-204ENST00000581979 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms