RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 C2orf40Q9H1Z8 148 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 UPF2Q9HAU5 1272 aaKnown RBP24.77■■□□□ 1.56
CASC3-207ENST00000581849 PRMT7Q9NVM4 692 aaPredicted RBP24.77■■□□□ 1.56
CASC3-207ENST00000581849 GIT1Q9Y2X7 761 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 A0A1B0GUA9 196 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 ARHGEF35A5YM69 484 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 CLASP2O75122 1294 aaKnown RBP24.76■■□□□ 1.55
CASC3-207ENST00000581849 DDHD2O94830 711 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 CYP11B2P19099 503 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 FAM187BQ17R55 369 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 SLC27A1Q6PCB7 646 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 PADI6Q6TGC4 694 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 RNF135Q8IUD6 432 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 ZBTB8OSQ8IWT0 167 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 BCL7CQ8WUZ0 217 aaPredicted RBP24.76■■□□□ 1.55
CASC3-207ENST00000581849 CPB2Q96IY4 423 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 TRIM6Q9C030 488 aaPredicted RBP24.76■■□□□ 1.55
CASC3-207ENST00000581849 GBP3Q9H0R5 595 aa24.76■■□□□ 1.55
CASC3-207ENST00000581849 A0A087WWV3 80 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 LRRIQ4A6NIV6 560 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 B4GALT3O60512 393 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 ITIH3Q06033 890 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 FZD8Q9H461 694 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 GPRC5CQ9NQ84 441 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 DZANK1Q9NVP4 752 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 LRWD1Q9UFC0 647 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 FAN1Q9Y2M0 1017 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 HCN4Q9Y3Q4 1203 aa24.75■■□□□ 1.55
CASC3-207ENST00000581849 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.74■■□□□ 1.55
CASC3-207ENST00000581849 FAM86C2PA6NEL3 165 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 ARL5CA6NH57 179 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 POMCP01189 267 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 PRPHP41219 470 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 MCM2P49736 904 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 TOB1P50616 345 aaPredicted RBP24.74■■□□□ 1.55
CASC3-207ENST00000581849 AFF1P51825 1210 aaKnown RBP24.74■■□□□ 1.55
CASC3-207ENST00000581849 DSC1Q08554 894 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 PPP2R5AQ15172 486 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 LLGL2Q6P1M3 1020 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 PPFIBP1Q86W92 1011 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 IGSF22Q8N9C0 903 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 NECTIN4Q96NY8 510 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 GAD1Q99259 594 aa24.74■■□□□ 1.55
CASC3-207ENST00000581849 TDRD15B5MCY1 1934 aaKnown RBP24.73■■□□□ 1.55
CASC3-207ENST00000581849 NRP1O14786 923 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 B4GALT5O43286 388 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 CCT6AP40227 531 aaKnown RBP24.73■■□□□ 1.55
CASC3-207ENST00000581849 NAMPTP43490 491 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 PTGDRQ13258 359 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 PTPN14Q15678 1187 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 COLGALT2Q8IYK4 626 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 TMEM87AQ8NBN3 555 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 VN1R3Q9BXE9 311 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 RNF39Q9H2S5 420 aa24.73■■□□□ 1.55
CASC3-207ENST00000581849 MLH1P40692 756 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 CES5AQ6NT32 575 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 MAEAQ7L5Y9 396 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 TMX3Q96JJ7 454 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 ADAM7Q9H2U9 754 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 NXF3Q9H4D5 531 aaKnown RBP24.72■■□□□ 1.55
CASC3-207ENST00000581849 MUTYHQ9UIF7 546 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 SSX2IPQ9Y2D8 614 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 HES2Q9Y543 173 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 PCDHB6Q9Y5E3 794 aa24.72■■□□□ 1.55
CASC3-207ENST00000581849 NR1I2O75469 434 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 CA8P35219 290 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 NBR1Q14596 966 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 MAPK6Q16659 721 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 RILPL1Q5EBL4 403 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 SLC22A17Q8WUG5 538 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 KIFAP3Q92845 792 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 EMILIN2Q9BXX0 1053 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.71■■□□□ 1.55
CASC3-207ENST00000581849 MARCH5Q9NX47 278 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 RAPGEFL1Q9UHV5 662 aa24.71■■□□□ 1.55
CASC3-207ENST00000581849 N4BP3O15049 544 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 NPTXRO95502 500 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 EFEMP2O95967 443 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 SOD2P04179 222 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 SCNN1GP51170 649 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 RNF168Q8IYW5 571 aaPredicted RBP24.7■■□□□ 1.54
CASC3-207ENST00000581849 SNX29Q8TEQ0 813 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 AUTS2Q8WXX7 1259 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 BSNDQ8WZ55 320 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 ZFP42Q96MM3 310 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 HERC2P3Q9BVR0 1158 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 CCDC113Q9H0I3 377 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 BHMT2Q9H2M3 363 aa24.7■■□□□ 1.54
CASC3-207ENST00000581849 MRPL17Q9NRX2 175 aaKnown RBP24.7■■□□□ 1.54
CASC3-207ENST00000581849 ACKR2O00590 384 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 LILRB3O75022 631 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 MTHFRP42898 656 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 EFNA5P52803 228 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 GRIK3Q13003 919 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 ECM1Q16610 540 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 KRT79Q5XKE5 535 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 GPR65Q8IYL9 337 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 KCTD17Q8N5Z5 321 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 GSTCDQ8NEC7 633 aa24.69■■□□□ 1.54
CASC3-207ENST00000581849 DEPTORQ8TB45 409 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms