RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ARMCX3Q9UH62 379 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PHF24Q9UPV7 400 aa15.13■□□□□ 0.01
CDK5RAP3-219ENST00000580670 DNM1LO00429 736 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ACKR2O00590 384 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GARTP22102 1010 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PTPN11Q06124 597 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PRPF4BQ13523 1007 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TMEM132AQ24JP5 1023 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SLFN12LQ6IEE8 588 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZPBP2Q6X784 338 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SRGAP1Q7Z6B7 1085 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZNF333Q96JL9 665 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ACO2Q99798 780 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GCOM2Q9BZD3 368 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 METTL14Q9HCE5 456 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 STARD7Q9NQZ5 370 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 OGDHLQ9ULD0 1010 aa15.12■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 LGALS16A8MUM7 142 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TEX33O43247 280 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PTGISQ16647 500 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FAM187BQ17R55 369 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 VWA3BQ502W6 1294 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MIIPQ5JXC2 388 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 RSPH3Q86UC2 560 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SERINC5Q86VE9 423 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TRIM59Q8IWR1 403 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 RDH13Q8NBN7 331 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SPC24Q8NBT2 197 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZSWIM2Q8NEG5 633 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SAAL1Q96ER3 474 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZBTB45Q96K62 511 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 OSMRQ99650 979 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CDHR5Q9HBB8 845 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ANKFY1Q9P2R3 1169 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 STYXL1Q9Y6J8 313 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GOLGA8IPA6NC78 632 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GOLGA8JA6NMD2 632 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 B4GALT5O43286 388 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 UBXN1Q04323 297 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PTPN21Q16825 1174 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZNF710Q8N1W2 664 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 NOD1Q9Y239 953 aa15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDK5RAP3-219ENST00000580670 M0QZ92 97 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TOM1L1O75674 476 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ERLIN2O94905 339 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 RPLP2P05387 115 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 AMHR2Q16671 573 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TSHZ1Q6ZSZ6 1077 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MTERF4Q7Z6M4 381 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 GPD1LQ8N335 351 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 WNT8BQ93098 351 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ARMC5Q96C12 935 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 BORCS6Q96GS4 357 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TCHPQ9BT92 498 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 HAPLN2Q9GZV7 340 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 NDST4Q9H3R1 872 aa15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TRMT13Q9NUP7 481 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 AGO2Q9UKV8 859 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 R3HCC1Q9Y3T6 440 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-219ENST00000580670 A0A0B4J269 797 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 DYNC1I1O14576 645 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 KIAA0391O15091 583 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MAPK13O15264 365 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CLDN3O15551 220 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 KRT13P13646 458 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 DARSP14868 501 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CRYBB1P53674 252 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MRPS6P82932 125 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SNRNP35Q16560 246 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 DCAF17Q5H9S7 520 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TCERG1LQ5VWI1 586 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TMC6Q7Z403 805 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ZBTB33Q86T24 672 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CBWD2Q8IUF1 395 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 VSTM4Q8IW00 320 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 SLC43A3Q8NBI5 491 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PKNOX2Q96KN3 472 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FAM213AQ9BRX8 229 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MSTO1Q9BUK6 570 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CELF4Q9BZC1 486 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CNTNAP2Q9UHC6 1331 aa15.09■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ARVCFO00192 962 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 EXTL3O43909 919 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TSPAN1O60635 241 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TFRCP02786 760 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ADRB2P07550 413 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 HARSP12081 509 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FGFR4P22455 802 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 EIF4BP23588 611 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PPP2R3AQ06190 1150 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 PTK7Q13308 1070 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms