RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CCND3P30281 292 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 HOXC12P31275 282 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 KCNJ6P48051 423 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 JAG1P78504 1218 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 RAB33AQ14088 237 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 FAM110CQ1W6H9 321 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 SLC10A6Q3KNW5 377 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 LRRC24Q50LG9 513 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 BEND3Q5T5X7 828 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 PAQR3Q6TCH7 311 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 RPTNQ6XPR3 784 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 SCYL3Q8IZE3 742 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 VGLL2Q8N8G2 317 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 ZSCAN18Q8TBC5 510 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 USP33Q8TEY7 942 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 TBC1D22AQ8WUA7 517 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 USP6NLQ92738 828 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 TSR2Q969E8 191 aaKnown RBP7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 CD320Q9NPF0 282 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 TMOD2Q9NZR1 351 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 MBD1Q9UIS9 605 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 AGTPBP1Q9UPW5 1226 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 RWDD3Q9Y3V2 267 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 WDFY4Q6ZS81 3184 aa7.95□□□□□ -1.14
PPP4R1-216ENST00000580283 DDTLA6NHG4 134 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 SRGAP3O43295 1099 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 TBX1O43435 398 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 CYP2B6P20813 491 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 ECI1P42126 302 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 FZD5Q13467 585 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 CBX2Q14781 532 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 CCL14Q16627 93 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 CCDC57Q2TAC2 916 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 ZC3H14Q6PJT7 736 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 CCDC140Q96MF4 163 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 MMP19Q99542 508 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 MYH16Q9H6N6 1097 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 GULP1Q9UBP9 304 aa7.94□□□□□ -1.14
PPP4R1-216ENST00000580283 ZNFX1Q9P2E3 1918 aaKnown RBP7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 C7orf72A4D263 438 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 TRIM75PA6NK02 468 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 CPP00450 1065 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 MAPKAPK2P49137 400 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 RRP1BQ14684 758 aaKnown RBP7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 RALBP1Q15311 655 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 PLEKHN1Q494U1 663 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 IQCEQ6IPM2 695 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 SMCR8Q8TEV9 937 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 FAM122AQ96E09 287 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 SENP6Q9GZR1 1112 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 CNTD2Q9H8S5 307 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 TXNRD2Q9NNW7 524 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 GCM1Q9NP62 436 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 USP40Q9NVE5 1235 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 CNOT6Q9ULM6 557 aaKnown RBP7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 SIPA1L1O43166 1804 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 GBF1Q92538 1859 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 CDK5RAP2Q96SN8 1893 aa7.93□□□□□ -1.14
PPP4R1-216ENST00000580283 CTNND1O60716 968 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 FOSL2P15408 326 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 FGFR2P21802 821 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 PRDX5P30044 214 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 GTF2F1P35269 517 aaKnown RBP eCLIP7.92□□□□□ -1.148e-7■■□□□ 14.3
PPP4R1-216ENST00000580283 RGS3P49796 1198 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 LINC00310P59036 64 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 SMAD3P84022 425 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 MAP3K12Q12852 859 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 TWISTNBQ3B726 338 aaPredicted RBP7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 E4F1Q66K89 784 aaPredicted RBP7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 LRRC56Q8IYG6 542 aaPredicted RBP7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 FRS2Q8WU20 508 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 STK31Q9BXU1 1019 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 DDX4Q9NQI0 724 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 MORF4L1Q9UBU8 362 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 IRAK3Q9Y616 596 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 RFX7Q2KHR2 1363 aa7.92□□□□□ -1.14
PPP4R1-216ENST00000580283 TRIM43BA6NCK2 446 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 GRM8O00222 908 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 RFXAPO00287 272 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 N4BP3O15049 544 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 MEFVO15553 781 aaPredicted RBP7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 NUAK1O60285 661 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 PDE8BO95263 885 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 ITGB8P26012 769 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 GCLCP48506 637 aaPredicted RBP7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 EPHB4P54760 987 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 SPP2Q13103 211 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 TAF7LQ5H9L4 462 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 KRTAP1-3Q8IUG1 177 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 NPLOC4Q8TAT6 608 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 KLHDC4Q8TBB5 520 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 DIO2Q92813 273 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 BADQ92934 168 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 TRIM43Q96BQ3 446 aaPredicted RBP7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 SUCLG2Q96I99 432 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 SIGLEC10Q96LC7 697 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 P2RX7Q99572 595 aaKnown RBP7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 LBHD1Q9BQE6 289 aaPredicted RBP7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 IDI2Q9BXS1 227 aa7.91□□□□□ -1.14
PPP4R1-216ENST00000580283 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms