RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 NLRP4Q96MN2 994 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CEP89Q96ST8 783 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 FBXO4Q9UKT5 387 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PPME1Q9Y570 386 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ANHXE9PGG2 379 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PRPF3O43395 683 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 GAS2O43903 313 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PSMD10O75832 226 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NCLP19338 710 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ADD1P35611 737 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MAGEA9P43362 315 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 OR1G1P47890 313 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 STARD6P59095 220 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DSG1Q02413 1049 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CREMQ03060 361 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PCBP1Q15365 356 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 TSGA10IPQ3SY00 556 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SLC7A3Q8WY07 619 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SECISBP2LQ93073 1101 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ZNF707Q96C28 371 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PRKD2Q9BZL6 878 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ZFHX4Q86UP3 3567 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ATRXP46100 2492 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 F5P12259 2224 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PRR5-ARHGAP8B1AHC4 643 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 RFPL2O75678 378 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 POMCP01189 267 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ITGA4P13612 1032 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PSMC5P62195 406 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ARHGAP8P85298 464 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NCBP1Q09161 790 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 HTR4Q13639 388 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 RSPO4Q2I0M5 234 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 Q4G0T1 1027 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 RNF168Q8IYW5 571 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 OSBPL6Q9BZF3 934 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CHST7Q9NS84 486 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 FNIP2Q9P278 1114 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PRG3Q9Y2Y8 225 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PCDHGA2Q9Y5H1 932 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MIA3Q5JRA6 1907 aa13.66□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ASAP2O43150 1006 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 LAMTOR5O43504 91 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 STBD1O95210 358 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 EFEMP2O95967 443 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 AXLP30530 894 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 AFF1P51825 1210 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PRKCQQ04759 706 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MTSS1LQ765P7 747 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 GET4Q7L5D6 327 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DCLK2Q8N568 766 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ATRIPQ8WXE1 791 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 COLEC11Q9BWP8 271 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MARCH5Q9NX47 278 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NUMBLQ9Y6R0 609 aa13.65□□□□□ -0.22
CDK5RAP3-216ENST00000579853 FAM208BQ5VWN6 2430 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 KANSL1LA0AUZ9 987 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TGM5O43548 720 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ERLIN2O94905 339 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FSHRP23945 695 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CYP3A7P24462 503 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RFC5P40937 340 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PFKPQ01813 784 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 LMNB2Q03252 620 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 DSC1Q08554 894 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RSPO2Q6UXX9 243 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ANO5Q75V66 913 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PALB2Q86YC2 1186 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 HACE1Q8IYU2 909 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PRPF31Q8WWY3 499 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CNTNAP3BQ96NU0 1288 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SH2D3AQ9BRG2 576 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FOXQ1Q9C009 403 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms