RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 CCDC194A0A1B0GVG4 234 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 GAS2O43903 313 aaKnown RBP23.42■■□□□ 1.34
TSEN54-205ENST00000578415 TSPAN1O60635 241 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 ITGA4P13612 1032 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 GCFC2P16383 781 aaKnown RBP23.42■■□□□ 1.34
TSEN54-205ENST00000578415 DSC1Q08554 894 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 EPHA7Q15375 998 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 CPLX2Q6PUV4 134 aaKnown RBP23.42■■□□□ 1.34
TSEN54-205ENST00000578415 CNNM3Q8NE01 707 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 TCP11Q8WWU5 503 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 GAD1Q99259 594 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 UBN1Q9NPG3 1134 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 IGSF9Q9P2J2 1179 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 FAM186AA6NE01 2351 aa23.42■■□□□ 1.34
TSEN54-205ENST00000578415 F8W810 466 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 ASAP2O43150 1006 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 NARSO43776 548 aaKnown RBP23.41■■□□□ 1.34
TSEN54-205ENST00000578415 ADH1AP07327 375 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 MLH1P40692 756 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 OR1G1P47890 313 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 SPIRE1Q08AE8 756 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 KIAA0319Q5VV43 1072 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 CCDC105Q8IYK2 499 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 SIX5Q8N196 739 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 DYDC2Q96IM9 177 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 RHOBTB2Q9BYZ6 727 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 RXFP1Q9HBX9 757 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 WDR6Q9NNW5 1121 aaKnown RBP23.41■■□□□ 1.34
TSEN54-205ENST00000578415 XPNPEP1Q9NQW7 623 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 GJB4Q9NTQ9 266 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 MIOSQ9NXC5 875 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 FBXL21Q9UKT6 434 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 HES2Q9Y543 173 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 C2orf16Q68DN1 1984 aa23.41■■□□□ 1.34
TSEN54-205ENST00000578415 VPS13AQ96RL7 3174 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 SPTBN4Q9H254 2564 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 CCDC195A0A1B0GUA6 201 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 ARL5CA6NH57 179 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 TBX3O15119 743 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 CCNT1O60563 726 aaKnown RBP23.4■■□□□ 1.34
TSEN54-205ENST00000578415 RFPL2O75678 378 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 ERLIN2O94905 339 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 MYBP10242 640 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 GLUD2P49448 558 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 PTENP60484 403 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 CTTNQ14247 550 aaKnown RBP23.4■■□□□ 1.34
TSEN54-205ENST00000578415 XKR9Q5GH70 373 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 OTUD6AQ7L8S5 288 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 POTEDQ86YR6 584 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 OXER1Q8TDS5 423 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 RSAD2Q8WXG1 361 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 NKD2Q969F2 451 aaPredicted RBP23.4■■□□□ 1.34
TSEN54-205ENST00000578415 CPB2Q96IY4 423 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 ZFP42Q96MM3 310 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 TM6SF1Q9BZW5 370 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 SSX2IPQ9Y2D8 614 aa23.4■■□□□ 1.34
TSEN54-205ENST00000578415 CLUHO75153 1309 aa23.39■■□□□ 1.34
TSEN54-205ENST00000578415 GLUD1P00367 558 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 AXLP30530 894 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 SCNN1GP51170 649 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 DSG1Q02413 1049 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 CYP4A11Q02928 519 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 PCBP1Q15365 356 aaKnown RBP eCLIP23.39■■□□□ 1.33
TSEN54-205ENST00000578415 NCAPH2Q6IBW4 605 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 NOTUMQ6P988 496 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 CYP26C1Q6V0L0 522 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 PIK3AP1Q6ZUJ8 805 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 CCDC51Q96ER9 411 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 MTRQ99707 1265 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 RTP3Q9BQQ7 232 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 ZSWIM4Q9H7M6 989 aa23.39■■□□□ 1.33
TSEN54-205ENST00000578415 EPB41L2O43491 1005 aaKnown RBP23.38■■□□□ 1.33
TSEN54-205ENST00000578415 DTNBO60941 627 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 PAPLNO95428 1278 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 GBP2P32456 591 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-205ENST00000578415 SCRN1Q12765 414 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 ANGPT1Q15389 498 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 AMHR2Q16671 573 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 EARS2Q5JPH6 523 aaKnown RBP23.38■■□□□ 1.33
TSEN54-205ENST00000578415 IFNLR1Q8IU57 520 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-205ENST00000578415 DTWD2Q8NBA8 298 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 ZNF707Q96C28 371 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-205ENST00000578415 MYADMQ96S97 322 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 CSRNP2Q9H175 543 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 CHST7Q9NS84 486 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 EPS15L1Q9UBC2 864 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 GVINP1Q7Z2Y8 2422 aa23.38■■□□□ 1.33
TSEN54-205ENST00000578415 KRBA1A5PL33 1030 aa23.37■■□□□ 1.33
TSEN54-205ENST00000578415 MBTD1Q05BQ5 628 aa23.37■■□□□ 1.33
TSEN54-205ENST00000578415 MXD4Q14582 209 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-205ENST00000578415 SMG7Q92540 1137 aaKnown RBP23.37■■□□□ 1.33
TSEN54-205ENST00000578415 B3GALT6Q96L58 329 aa23.37■■□□□ 1.33
TSEN54-205ENST00000578415 STK36Q9NRP7 1315 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 FAM205CA6NFA0 338 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 INO80B-WBP1J3KQ70 363 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 MARCH6O60337 910 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 SLITRK3O94933 977 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 CFHP08603 1231 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 SPATA31D3P0C874 917 aa23.36■■□□□ 1.33
TSEN54-205ENST00000578415 POU5F1BQ06416 359 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms