RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 DGKDQ16760 1214 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 SEPT14Q6ZU15 432 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 AGGF1Q8N302 714 aaeCLIP10.71□□□□□ -0.69
CIITA-208ENST00000572665 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
CIITA-208ENST00000572665 CAGE1Q8TC20 777 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 PHOSPHO2Q8TCD6 241 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 ATXN2LQ8WWM7 1075 aaKnown RBP10.71□□□□□ -0.69
CIITA-208ENST00000572665 RMDN3Q96TC7 470 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 TANC1Q9C0D5 1861 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 WNT8AQ9H1J5 351 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 CYP4F12Q9HCS2 524 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 TRMT13Q9NUP7 481 aaKnown RBP10.71□□□□□ -0.69
CIITA-208ENST00000572665 ZSWIM5Q9P217 1185 aa10.71□□□□□ -0.69
CIITA-208ENST00000572665 DDX49Q9Y6V7 483 aaKnown RBP10.71□□□□□ -0.69
CIITA-208ENST00000572665 UMODL1Q5DID0 1318 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 GRXCR1A8MXD5 290 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 BAIAP3O94812 1187 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 CYP2C9P11712 490 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 ADH5P11766 374 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 ZNF165P49910 485 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 QRICH1Q2TAL8 776 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 CYFIP1Q7L576 1253 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 RALYLQ86SE5 291 aaKnown RBP10.7□□□□□ -0.7
CIITA-208ENST00000572665 SESTD1Q86VW0 696 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 REXO1Q8N1G1 1221 aaKnown RBP10.7□□□□□ -0.7
CIITA-208ENST00000572665 SYTL5Q8TDW5 730 aaPredicted RBP10.7□□□□□ -0.7
CIITA-208ENST00000572665 AFAP1L1Q8TED9 768 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 SCLYQ96I15 445 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
CIITA-208ENST00000572665 NACC1Q96RE7 527 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 FTOQ9C0B1 505 aaKnown RBP eCLIP10.7□□□□□ -0.7
CIITA-208ENST00000572665 NKX2-4Q9H2Z4 354 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 PRDM12Q9H4Q4 367 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 VAT1LQ9HCJ6 419 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 CRIM1Q9NZV1 1036 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 THEGQ9P2T0 379 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 MRVI1Q9Y6F6 885 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
CIITA-208ENST00000572665 MYO9BQ13459 2157 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 C9orf172C9J069 976 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 TIAF1O95411 115 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 CFBP00751 764 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 IGHDP01880 384 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 MMP3P08254 477 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 ATP2B1P20020 1258 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 MCM4P33991 863 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 KCNJ6P48051 423 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 CHMP4BP1P59074 171 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 PTGISQ16647 500 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 AAK1Q2M2I8 961 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 TMEM63BQ5T3F8 832 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 DEFB128Q7Z7B8 93 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
CIITA-208ENST00000572665 C7orf31Q8N865 590 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 PPM1EQ8WY54 764 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 AKTIPQ9H8T0 292 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
CIITA-208ENST00000572665 TRIP12Q14669 1992 aaPredicted RBP10.68□□□□□ -0.7
CIITA-208ENST00000572665 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 ZBTB5O15062 677 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 EFCAB14O75071 495 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 ALX3O95076 343 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 TGFB3P10600 412 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 PTGS1P23219 599 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
CIITA-208ENST00000572665 NRG1Q02297 640 aaPredicted RBP10.68□□□□□ -0.7
CIITA-208ENST00000572665 RING1Q06587 406 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 SOX4Q06945 474 aaPredicted RBP10.68□□□□□ -0.7
CIITA-208ENST00000572665 ANKRD34AQ69YU3 496 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 FDX2Q6P4F2 183 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 Q6ZS46 218 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 C12orf40Q86WS4 652 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 DHX37Q8IY37 1157 aaKnown RBP10.68□□□□□ -0.7
CIITA-208ENST00000572665 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 COPS5Q92905 334 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 TAAR1Q96RJ0 339 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 CPVLQ9H3G5 476 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 JMJD4Q9H9V9 463 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 PPT2Q9UMR5 302 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 AP4E1Q9UPM8 1137 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 HIF3AQ9Y2N7 669 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 PCDHA1Q9Y5I3 950 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 SCN5AQ14524 2016 aa10.68□□□□□ -0.7
CIITA-208ENST00000572665 STAM2O75886 525 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 ATE1O95260 518 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 ARIH2O95376 493 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 HSD17B4P51659 736 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 GHRHRQ02643 423 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 CLCQ05315 142 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 ARHGAP1Q07960 439 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 LY6KQ17RY6 165 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 GNPTABQ3T906 1256 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 GK5Q6ZS86 529 aa10.67□□□□□ -0.7
CIITA-208ENST00000572665 CHST3Q7LGC8 479 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms