RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TUFT1Q9NNX1 390 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 TBC1D13Q9NVG8 400 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 CLEC1BQ9P126 229 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 KIF3AQ9Y496 699 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 TSPAN1O60635 241 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 OFD1O75665 1012 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 EYA4O95677 639 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 XRCC6P12956 609 aaKnown RBP eCLIP13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 COL9A1P20849 921 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 CA8P35219 290 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 TECP42680 631 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 CAPSQ13938 189 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 NOTUMQ6P988 496 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 CATSPER3Q86XQ3 398 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 GBP3Q9H0R5 595 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
CTDNEP1-205ENST00000570828 ATG2AQ2TAZ0 1938 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 HIDE1A8MVS5 230 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 NT5C1B-RDH14C9J2C7 533 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 MED24O75448 989 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 SPATA31C1P0DKV0 1188 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 ALADP13716 330 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 GLRA2P23416 452 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 AXLP30530 894 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 ARL2P36404 184 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 TMEM31Q5JXX7 168 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 UBXN11Q5T124 520 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 AGMOQ6ZNB7 445 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 MRPL10Q7Z7H8 261 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 VN1R2Q8NFZ6 395 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 NACC1Q96RE7 527 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 POLR3CQ9BUI4 534 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 NFKBIZQ9BYH8 718 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 IRX2Q9BZI1 471 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 NRDE2Q9H7Z3 1164 aa13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 DBR1Q9UK59 544 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-205ENST00000570828 A0A087WWV3 80 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 ARHGEF35A5YM69 484 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 LRRIQ4A6NIV6 560 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 PI4K2BG5E9Z4 385 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 DCXO43602 365 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 ITGA4P13612 1032 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 RPA1P27694 616 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 RBM10P98175 930 aaKnown RBP13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 DSG2Q14126 1118 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 MAEAQ7L5Y9 396 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 FAM193BQ96PV7 902 aaPredicted RBP13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 EIF2AQ9BY44 585 aaKnown RBP13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 GPRC5CQ9NQ84 441 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 IPPQ9Y573 584 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 PLXNA4Q9HCM2 1894 aa13.71□□□□□ -0.21
CTDNEP1-205ENST00000570828 C5orf42Q9H799 3197 aa13.71□□□□□ -0.22
CTDNEP1-205ENST00000570828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 C2orf71A6NGG8 1288 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 GALTP07902 379 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 SLC11A1P49279 550 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 PADI6Q6TGC4 694 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 ZBTB8OSQ8IWT0 167 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 MRPL43Q8N983 215 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 CPB2Q96IY4 423 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 LRFN3Q9BTN0 628 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 RAB34Q9BZG1 259 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 DNAJB4Q9UDY4 337 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 STK39Q9UEW8 545 aa13.7□□□□□ -0.22
CTDNEP1-205ENST00000570828 B4GALT5O43286 388 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 CXCL14O95715 111 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 POMCP01189 267 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 MUTP22033 750 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 CCT6AP40227 531 aaKnown RBP13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 MLH1P40692 756 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 GIT2Q14161 759 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 AMHR2Q16671 573 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms