RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SLC16A3O15427 465 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 TSPAN1O60635 241 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 IQCF3P0C7M6 154 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 GARTP22102 1010 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 EIF4BP23588 611 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 KCNJ12Q14500 433 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 AMHR2Q16671 573 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 CCDC40Q4G0X9 1142 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 ATF7IP2Q5U623 682 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 CEP135Q66GS9 1140 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 CREBRFQ8IUR6 639 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 TMEM40Q8WWA1 233 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 PAWRQ96IZ0 340 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 HSPBP1Q9NZL4 362 aa16.86■□□□□ 0.29
HERPUD1-219ENST00000570273 EXOC3O60645 756 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 TOM1L1O75674 476 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 GNA14O95837 355 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 EEF1GP26641 437 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 ADSSP30520 456 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 MYBPC2Q14324 1141 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 PCBP1Q15365 356 aaKnown RBP eCLIP16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 TRIM60Q495X7 471 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 SLFN12LQ6IEE8 588 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 FILIP1Q7Z7B0 1213 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 IRF2BP1Q8IU81 584 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 CPB2Q96IY4 423 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 ZBTB45Q96K62 511 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 DMAC2Q9NW81 257 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 FRMD4BQ9Y2L6 1034 aa16.85■□□□□ 0.29
HERPUD1-219ENST00000570273 DCDC2CA8MYV0 355 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 CD4P01730 458 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 CHRNA1P02708 482 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 CKBP12277 381 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 MTIF2P46199 727 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 ZNF568Q3ZCX4 644 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 TCP11X2Q5H9J9 407 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 FAM26DQ5JW98 314 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 MPZL3Q6UWV2 235 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 NECAB2Q7Z6G3 386 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 ZBTB33Q86T24 672 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 SAAL1Q96ER3 474 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 TCHPQ9BT92 498 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 MSTO1Q9BUK6 570 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 TNFSF13BQ9Y275 285 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 STYXL1Q9Y6J8 313 aa16.84■□□□□ 0.29
HERPUD1-219ENST00000570273 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.29
HERPUD1-219ENST00000570273 GOLGA8IPA6NC78 632 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 N4BP3O15049 544 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 CLDN3O15551 220 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 RPS6KA5O75582 802 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 AKAP3O75969 853 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 SERPINC1P01008 464 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 ARF4P18085 180 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 PSMC2P35998 433 aaKnown RBP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 CASP4P49662 377 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 FANCCQ00597 558 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 TLE2Q04725 743 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 RBL2Q08999 1139 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 BFSP2Q13515 415 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 NOLC1Q14978 699 aaKnown RBP eCLIP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 KRT31Q15323 416 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 C1orf53Q5VUE5 145 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 EEF1DP3Q658K8 133 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 ANKRD33Q7Z3H0 272 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 FAM228AQ86W67 206 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 CDR2LQ86X02 465 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 FAM186BQ8IYM0 893 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 TMEM174Q8WUU8 243 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 PDZD7Q9H5P4 517 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 TAB2Q9NYJ8 693 aa16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 AGO2Q9UKV8 859 aaKnown RBP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 NOC2LQ9Y3T9 749 aaKnown RBP16.83■□□□□ 0.28
HERPUD1-219ENST00000570273 A0A0B4J269 797 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 GHRP10912 638 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 PROZP22891 400 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 RGS19P49795 217 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 MCL1Q07820 350 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 FBXO47Q5MNV8 452 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 GPD1LQ8N335 351 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 ZSWIM2Q8NEG5 633 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 TOX2Q96NM4 488 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 HAPLN2Q9GZV7 340 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 CDT1Q9H211 546 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
HERPUD1-219ENST00000570273 LIMA1Q9UHB6 759 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms