RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 GLCCI1Q86VQ1 547 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 LINC00476Q8WZB0 136 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 COQ10AQ96MF6 247 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 OXSMQ9NWU1 459 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 PCDHB6Q9Y5E3 794 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 MYPNQ86TC9 1320 aa6.75□□□□□ -1.33
CHD9-220ENST00000569794 INO80B-WBP1J3KQ70 363 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 NDUFA10O95299 355 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 GZMKP49863 264 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 GPRIN1Q7Z2K8 1008 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 XYLT1Q86Y38 959 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 ZZZ3Q8IYH5 903 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 CMTR2Q8IYT2 770 aaKnown RBP6.74□□□□□ -1.33
CHD9-220ENST00000569794 LILRB2Q8N423 598 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 INO80BQ9C086 356 aaPredicted RBP6.74□□□□□ -1.33
CHD9-220ENST00000569794 ZMAT4Q9H898 229 aa6.74□□□□□ -1.33
CHD9-220ENST00000569794 ELL2O00472 640 aaPredicted RBP6.73□□□□□ -1.33
CHD9-220ENST00000569794 ZSCAN20P17040 1043 aaPredicted RBP6.73□□□□□ -1.33
CHD9-220ENST00000569794 BMPR1AP36894 532 aa6.73□□□□□ -1.33
CHD9-220ENST00000569794 SEC24CP53992 1094 aa6.73□□□□□ -1.33
CHD9-220ENST00000569794 PRR16Q569H4 304 aa6.73□□□□□ -1.33
CHD9-220ENST00000569794 FBXO42Q6P3S6 717 aa6.73□□□□□ -1.33
CHD9-220ENST00000569794 CDYL2Q8N8U2 506 aa6.73□□□□□ -1.33
CHD9-220ENST00000569794 INTS7Q9NVH2 962 aaKnown RBP6.73□□□□□ -1.33
CHD9-220ENST00000569794 SPATA31A6Q5VVP1 1343 aa6.73□□□□□ -1.33
CHD9-220ENST00000569794 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 SEC24DO94855 1032 aaPredicted RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 JMJD7P0C870 316 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 CANXP27824 592 aaKnown RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 RNASE9P60153 205 aaKnown RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 DUSP2Q05923 314 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 CDCA2Q69YH5 1023 aaPredicted RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 UBE2R2Q712K3 238 aaPredicted RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 TAS1R1Q7RTX1 841 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 PLXDC1Q8IUK5 500 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 SYT12Q8IV01 421 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 MSL3Q8N5Y2 521 aaKnown RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 FDXACB1Q9BRP7 624 aaPredicted RBP6.72□□□□□ -1.33
CHD9-220ENST00000569794 TEX101Q9BY14 249 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 INSL6Q9Y581 213 aa6.72□□□□□ -1.33
CHD9-220ENST00000569794 DIRC3C9JPN6 131 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 ZNF185O15231 689 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 HKR1P10072 659 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 FLT3P36888 993 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 NHLH2Q02577 135 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 FOXI1Q12951 378 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 CPEB3Q8NE35 698 aaKnown RBP6.71□□□□□ -1.34
CHD9-220ENST00000569794 CAVIN3Q969G5 261 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 H2AFY2Q9P0M6 372 aaPredicted RBP6.71□□□□□ -1.34
CHD9-220ENST00000569794 USP36Q9P275 1121 aaKnown RBP6.71□□□□□ -1.34
CHD9-220ENST00000569794 CLCA2Q9UQC9 943 aa6.71□□□□□ -1.34
CHD9-220ENST00000569794 PIPSLA2A3N6 862 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 PFKMP08237 780 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 CDK4P11802 303 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 ATP2A2P16615 1042 aaKnown RBP6.7□□□□□ -1.34
CHD9-220ENST00000569794 CD40P25942 277 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 GUCY1B3Q02153 619 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 DRICH1Q6PGQ1 229 aaPredicted RBP6.7□□□□□ -1.34
CHD9-220ENST00000569794 BTNL9Q6UXG8 535 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 SPON1Q9HCB6 807 aa6.7□□□□□ -1.34
CHD9-220ENST00000569794 UNC119BA6NIH7 251 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 SDSP20132 328 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 LRRC32Q14392 662 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 ERCC6LQ2NKX8 1250 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 CFAP100Q494V2 611 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 ZBTB41Q5SVQ8 909 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 FAM98AQ8NCA5 519 aaKnown RBP6.69□□□□□ -1.34
CHD9-220ENST00000569794 ORAI3Q9BRQ5 295 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 RSAD1Q9HA92 442 aa6.69□□□□□ -1.34
CHD9-220ENST00000569794 ST20-MTHFSA0A0A6YYL1 179 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 A0A1W2PR48 441 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 DDX6P26196 483 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD9-220ENST00000569794 PTH2RP49190 550 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 PDCD4Q53EL6 469 aaKnown RBP6.68□□□□□ -1.34
CHD9-220ENST00000569794 SIMC1Q8NDZ2 872 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 OR10H5Q8NGA6 315 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 SREK1Q8WXA9 508 aaKnown RBP6.68□□□□□ -1.34
CHD9-220ENST00000569794 NELL1Q92832 810 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 ADAM2Q99965 735 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 USP18Q9UMW8 372 aa6.68□□□□□ -1.34
CHD9-220ENST00000569794 CXCR5P32302 372 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 BLOC1S1P78537 153 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 TP53BP2Q13625 1128 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 SOGA3Q5TF21 947 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 ABHD17BQ5VST6 288 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 ESPNLQ6ZVH7 1005 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 EFHBQ8N7U6 833 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 GAB3Q8WWW8 586 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 FERMT2Q96AC1 680 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 ZNF496Q96IT1 587 aaPredicted RBP6.67□□□□□ -1.34
CHD9-220ENST00000569794 ALG13Q9NP73 1137 aaKnown RBP6.67□□□□□ -1.34
CHD9-220ENST00000569794 ZKSCAN5Q9Y2L8 839 aa6.67□□□□□ -1.34
CHD9-220ENST00000569794 MARCH11A6NNE9 402 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 NRP2O60462 931 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 GPR15P49685 360 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 CCDC178Q5BJE1 867 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 PAPD7Q5XG87 772 aaKnown RBP6.66□□□□□ -1.34
CHD9-220ENST00000569794 ANKS6Q68DC2 871 aa6.66□□□□□ -1.34
CHD9-220ENST00000569794 ASB10Q8WXI3 467 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms