RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SSX2IPQ9Y2D8 614 aa14.6□□□□□ -0.07
SPG7-221ENST00000569720 NRP1O14786 923 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 NEMFO60524 1076 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 TSPAN1O60635 241 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 POMCP01189 267 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 SSBP05455 408 aaKnown RBP eCLIP14.59□□□□□ -0.07
SPG7-221ENST00000569720 WEE2P0C1S8 567 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 TXKP42681 527 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 OR1G1P47890 313 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 RBM25P49756 843 aaKnown RBP14.59□□□□□ -0.07
SPG7-221ENST00000569720 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
SPG7-221ENST00000569720 DIS3L2Q8IYB7 885 aaKnown RBP14.59□□□□□ -0.07
SPG7-221ENST00000569720 SMG8Q8ND04 991 aaKnown RBP14.59□□□□□ -0.07
SPG7-221ENST00000569720 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
SPG7-221ENST00000569720 HSD17B14Q9BPX1 270 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 TRIM6Q9C030 488 aaPredicted RBP14.59□□□□□ -0.07
SPG7-221ENST00000569720 CSRNP2Q9H175 543 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 SFXN1Q9H9B4 322 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 XPNPEP1Q9NQW7 623 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 USTQ9Y2C2 406 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 IPPQ9Y573 584 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 DENND4AQ7Z401 1863 aa14.59□□□□□ -0.07
SPG7-221ENST00000569720 BTBD18B2RXH4 712 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 B4GALT3O60512 393 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 SOD2P04179 222 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 URODP06132 367 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 XRCC6P12956 609 aaKnown RBP eCLIP14.58□□□□□ -0.08
SPG7-221ENST00000569720 AFF1P51825 1210 aaKnown RBP14.58□□□□□ -0.08
SPG7-221ENST00000569720 NEK4P51957 841 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 SAFBQ15424 915 aaKnown RBP eCLIP14.58□□□□□ -0.08
SPG7-221ENST00000569720 ELMSAN1Q6PJG2 1045 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 TMC5Q6UXY8 1006 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 ZDHHC14Q8IZN3 488 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 PRSS33Q8NF86 280 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 ACSF2Q96CM8 615 aaPredicted RBP14.58□□□□□ -0.08
SPG7-221ENST00000569720 CPB2Q96IY4 423 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 KLHL5Q96PQ7 755 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 VN1R3Q9BXE9 311 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 EIF2AQ9BY44 585 aaKnown RBP14.58□□□□□ -0.08
SPG7-221ENST00000569720 IRF2BPLQ9H1B7 796 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 DPP7Q9UHL4 492 aa14.58□□□□□ -0.08
SPG7-221ENST00000569720 PRG3Q9Y2Y8 225 aaPredicted RBP14.58□□□□□ -0.08
SPG7-221ENST00000569720 C2orf16Q68DN1 1984 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 ARL5CA6NH57 179 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 INPPL1O15357 1258 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 LARGE1O95461 756 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 CNPP09543 421 aaKnown RBP14.57□□□□□ -0.08
SPG7-221ENST00000569720 AVPR2P30518 371 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 ARL2P36404 184 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 MLH1P40692 756 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 RARRES1P49788 294 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 CLCN4P51793 760 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 FOSBP53539 338 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 MBTD1Q05BQ5 628 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 CAPSQ13938 189 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 IER5LQ5T953 404 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 GPR149Q86SP6 731 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 COLGALT2Q8IYK4 626 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 ASAP3Q8TDY4 903 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 GAD1Q99259 594 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 HERC2P3Q9BVR0 1158 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 APOL6Q9BWW8 343 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 NFKBIZQ9BYH8 718 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 GIT1Q9Y2X7 761 aa14.57□□□□□ -0.08
SPG7-221ENST00000569720 C2CD2LO14523 706 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 JAK2O60674 1132 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 LILRB3O75022 631 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 ADH1AP07327 375 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 ARF4P18085 180 aaPredicted RBP14.56□□□□□ -0.08
SPG7-221ENST00000569720 SCNN1GP51170 649 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 NUBP1P53384 320 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 KANK3Q6NY19 840 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 SLC27A1Q6PCB7 646 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 CCDC149Q6ZUS6 474 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 OTOP3Q7RTS5 596 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 PIGOQ8TEQ8 1089 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 MTMR9Q96QG7 549 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 RPS6KC1Q96S38 1066 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 POLR3FQ9H1D9 316 aaPredicted RBP14.56□□□□□ -0.08
SPG7-221ENST00000569720 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 LIMD1Q9UGP4 676 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 HES2Q9Y543 173 aa14.56□□□□□ -0.08
SPG7-221ENST00000569720 PLXNA3P51805 1871 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 MTCL1Q9Y4B5 1905 aaKnown RBP14.55□□□□□ -0.08
SPG7-221ENST00000569720 USO1O60763 962 aaKnown RBP14.55□□□□□ -0.08
SPG7-221ENST00000569720 BRD1O95696 1058 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 ATP2B1P20020 1258 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 GLRA2P23416 452 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 MCM7P33993 719 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 GLUD2P49448 558 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 VCPP55072 806 aaKnown RBP14.55□□□□□ -0.08
SPG7-221ENST00000569720 DSC1Q08554 894 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 AMHR2Q16671 573 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 C15orf39Q6ZRI6 1047 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 ZBTB8OSQ8IWT0 167 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 MCPH1Q8NEM0 835 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 TUFT1Q9NNX1 390 aa14.55□□□□□ -0.08
SPG7-221ENST00000569720 MARCH5Q9NX47 278 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms