RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CXCL16Q9H2A7 254 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 ADAM7Q9H2U9 754 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 SMOC2Q9H3U7 446 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 LIMCH1Q9UPQ0 1083 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 CACNA1HO95180 2353 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 CNTNAP2Q9UHC6 1331 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 VWA8A3KMH1 1905 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 MTCL1Q9Y4B5 1905 aaKnown RBP15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 DOCK8Q8NF50 2099 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 TMEM221A6NGB7 291 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 ARL5CA6NH57 179 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 INO80B-WBP1J3KQ70 363 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 M0R296 226 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 NRP1O14786 923 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 SSBP05455 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 CA8P35219 290 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 MLH1P40692 756 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 SCNN1GP51170 649 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 MXD4Q14582 209 aaPredicted RBP15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 ZNF174Q15697 407 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 ECM1Q16610 540 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 RARS2Q5T160 578 aaKnown RBP15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 MAEAQ7L5Y9 396 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 EXOC8Q8IYI6 725 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 C4orf32Q8N8J7 132 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 RSPH1Q8WYR4 309 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 CSRNP2Q9H175 543 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 USP20Q9Y2K6 914 aa15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 PRG3Q9Y2Y8 225 aaPredicted RBP15.39■□□□□ 0.05
GTF3C1-211ENST00000569653 C2CD4DB7Z1M9 353 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 ERLIN2O94905 339 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 CNPP09543 421 aaKnown RBP15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 SRGAP2BP0DMP2 458 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 ITGA4P13612 1032 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 POU5F1BQ06416 359 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 TRIM29Q14134 588 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 IER5LQ5T953 404 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 URGCPQ8TCY9 931 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 C8orf76Q96K31 380 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 TMEM175Q9BSA9 504 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 APOL6Q9BWW8 343 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 NFKBIZQ9BYH8 718 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 POLD4Q9HCU8 107 aa15.38■□□□□ 0.05
GTF3C1-211ENST00000569653 PDGFBP01127 241 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 OR52Z1P0C646 297 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 AKAP5P24588 427 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 PTPN21Q16825 1174 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 CDCA2Q69YH5 1023 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 NOTUMQ6P988 496 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 BMP8AQ7Z5Y6 402 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 FBXO18Q8NFZ0 1043 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 CCDC51Q96ER9 411 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 B3GALT6Q96L58 329 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 KLHL5Q96PQ7 755 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 LLPHQ9BRT6 129 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 FAN1Q9Y2M0 1017 aa15.37■□□□□ 0.05
GTF3C1-211ENST00000569653 A0A1B0GUA9 196 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 NPTXRO95502 500 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 XRCC6P12956 609 aaKnown RBP eCLIP15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 AXLP30530 894 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 CLCN4P51793 760 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 TFDP1Q14186 410 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 TPRNQ4KMQ1 711 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 TTC38Q5R3I4 469 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 KIAA1841Q6NSI8 718 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 TMC5Q6UXY8 1006 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 PRSS33Q8NF86 280 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 PAAF1Q9BRP4 392 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 HERC2P3Q9BVR0 1158 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 FOXP1Q9H334 677 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 TUFT1Q9NNX1 390 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 TSHZ2Q9NRE2 1034 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 KLK14Q9P0G3 267 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 USP34Q70CQ2 3546 aa15.36■□□□□ 0.05
GTF3C1-211ENST00000569653 LRRIQ4A6NIV6 560 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 C2CD2LO14523 706 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 BRD1O95696 1058 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 SOD2P04179 222 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 IGFBP6P24592 240 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 NHLH1Q02575 133 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 ITIH3Q06033 890 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 SIGLEC14Q08ET2 396 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 PCBP1Q15365 356 aaKnown RBP eCLIP15.35■□□□□ 0.054e-6■■□□□ 12.9
GTF3C1-211ENST00000569653 KIAA0319Q5VV43 1072 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 PADI6Q6TGC4 694 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 PBXIP1Q96AQ6 731 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 PHOX2BQ99453 314 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 KIFC3Q9BVG8 833 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 CCDC113Q9H0I3 377 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 FZD8Q9H461 694 aa15.35■□□□□ 0.05
GTF3C1-211ENST00000569653 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms