RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 ECHDC2Q86YB7 292 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 MAP4K3Q8IVH8 894 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 HACE1Q8IYU2 909 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 KCNN1Q92952 543 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 HPS3Q969F9 1004 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TOP1MTQ969P6 601 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TCHPQ9BT92 498 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TARS2Q9BW92 718 aaKnown RBP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TRAIPQ9BWF2 469 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 PDZD7Q9H5P4 517 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 ELAC1Q9H777 363 aaKnown RBP14.33□□□□□ -0.12
CNOT1-217ENST00000569263 TMEM161AQ9NX61 479 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 EXOC7Q9UPT5 735 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 PCDHB2Q9Y5E7 798 aa14.33□□□□□ -0.12
CNOT1-217ENST00000569263 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 GRXCR1A8MXD5 290 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 TLL1O43897 1013 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 KLRC4O43908 158 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 GJB5O95377 273 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 MYBP10242 640 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 CASP5P51878 434 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 PSMD2Q13200 908 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 DCAF4L1Q3SXM0 396 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 UBXN11Q5T124 520 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 L1TD1Q5T7N2 865 aaKnown RBP14.32□□□□□ -0.12
CNOT1-217ENST00000569263 EEF1DP3Q658K8 133 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 FAM109BQ6ICB4 259 aaPredicted RBP14.32□□□□□ -0.12
CNOT1-217ENST00000569263 ZPBP2Q6X784 338 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 SYCP3Q8IZU3 236 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 SMARCE1Q969G3 411 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 PGBD4Q96DM1 585 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 ACCSQ96QU6 501 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 YME1L1Q96TA2 773 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 ACO2Q99798 780 aaKnown RBP14.32□□□□□ -0.12
CNOT1-217ENST00000569263 EIF2AQ9BY44 585 aaKnown RBP14.32□□□□□ -0.12
CNOT1-217ENST00000569263 SLC39A2Q9NP94 309 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 RMND1Q9NWS8 449 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 TNFSF13BQ9Y275 285 aa14.32□□□□□ -0.12
CNOT1-217ENST00000569263 FNDC1Q4ZHG4 1894 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-217ENST00000569263 EIF3DO15371 548 aaKnown RBP eCLIP14.31□□□□□ -0.12
CNOT1-217ENST00000569263 HOXA2O43364 376 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 TOM1L1O75674 476 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 PPP1R37O75864 691 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
CNOT1-217ENST00000569263 EOMESO95936 686 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
CNOT1-217ENST00000569263 RABGGTBP53611 331 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 FAM189BP81408 668 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 EHHADHQ08426 723 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 RAB30Q15771 203 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 MPZL3Q6UWV2 235 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-217ENST00000569263 ABI1Q8IZP0 508 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 APOL6Q9BWW8 343 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 FGFBP2Q9BYJ0 223 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 TMEM206Q9H813 350 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 MSRAQ9UJ68 235 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 IPPQ9Y573 584 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 UBE4BO95155 1302 aa14.31□□□□□ -0.12
CNOT1-217ENST00000569263 ZNF623O75123 536 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 MBD3O95983 291 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 PIGRP01833 764 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 ITGA4P13612 1032 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 SMAD3P84022 425 aaKnown RBP14.3□□□□□ -0.12
CNOT1-217ENST00000569263 KCNB1Q14721 858 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 NOLC1Q14978 699 aaKnown RBP eCLIP14.3□□□□□ -0.12
CNOT1-217ENST00000569263 CAMK4Q16566 473 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 GLIS3Q8NEA6 775 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 LPPQ93052 612 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 RAD9AQ99638 391 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 STRA6Q9BX79 667 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 CDT1Q9H211 546 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 NXF3Q9H4D5 531 aaKnown RBP14.3□□□□□ -0.12
CNOT1-217ENST00000569263 INSL6Q9Y581 213 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 PCDHA11Q9Y5I1 949 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 COL4A6Q14031 1691 aa14.3□□□□□ -0.12
CNOT1-217ENST00000569263 NLRC5Q86WI3 1866 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 CITO14578 2027 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 CLDN3O15551 220 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 DGKIO75912 1065 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 KIF20AO95235 890 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 MCF2P10911 925 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 FGFR1P11362 822 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 ATF7P17544 494 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 PROZP22891 400 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 MCM4P33991 863 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 GATMP50440 423 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 KCNA1Q09470 495 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 PAN2Q504Q3 1202 aaKnown RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 GLB1LQ6UWU2 654 aa14.29□□□□□ -0.12
CNOT1-217ENST00000569263 MRPL10Q7Z7H8 261 aaKnown RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
CNOT1-217ENST00000569263 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms