RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PTPRKQ15262 1439 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 RAB11FIP3O75154 756 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 LPLP06858 475 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 GAAP10253 952 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 CNGA1P29973 690 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 SESN2P58004 480 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 BPIFB4P59827 614 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 TMPRSS15P98073 1019 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 CD69Q07108 199 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 FOXL1Q12952 345 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 PITRM1Q5JRX3 1037 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 CCDC62Q6P9F0 684 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 GAREM2Q75VX8 874 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 PALM2Q8IXS6 379 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 ANKRD13AQ8IZ07 590 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 CDYL2Q8N8U2 506 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 ANKRD53Q8N9V6 530 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 PLA2G15Q8NCC3 412 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 PIK3C3Q8NEB9 887 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 GAB3Q8WWW8 586 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 RABGGTAQ92696 567 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 GCDHQ92947 438 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 DVL3Q92997 716 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 LPPQ93052 612 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 TMEM176AQ96HP8 235 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 HIST1H2AHQ96KK5 128 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 HIST1H2AJQ99878 128 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 OSBPL6Q9BZF3 934 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 KLC2Q9H0B6 622 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 SLC6A15Q9H2J7 730 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 DEF6Q9H4E7 631 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 NUMBLQ9Y6R0 609 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 ADGBQ8N7X0 1667 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 VWDEQ8N2E2 1590 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 TCOF1Q13428 1488 aaKnown RBP4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 ARHGAP35Q9NRY4 1499 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 TROQ12816 1431 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 ST20-MTHFSA0A0A6YYL1 179 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 PMS2P1A4D2B8 440 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 GPR39O43194 453 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 BRINP1O60477 761 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 ULK1O75385 1050 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 TOX4O94842 621 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 SEC24DO94855 1032 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 COMTP21964 271 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 SESN3P58005 492 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 PPARAQ07869 468 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 GGNQ86UU5 652 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 COG1Q8WTW3 980 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 EAF2Q96CJ1 260 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 PLA2G3Q9NZ20 509 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 EVLQ9UI08 416 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 PRSS50Q9UI38 385 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 SYNPO2Q9UMS6 1093 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 EDARQ9UNE0 448 aa4.57□□□□□ -1.68
HMGB1P6-201ENST00000569046 ATP7AQ04656 1500 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 CLIP1P30622 1438 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 NPATQ14207 1427 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 CNTLNQ9NXG0 1405 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 SPAG9O60271 1321 aaKnown RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 ZNF644Q9H582 1327 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 PRKD3O94806 890 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 LY86O95711 162 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 MSX2P35548 267 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 RPS19P39019 145 aaKnown RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 KIR2DL3P43628 341 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 SELENOPP49908 381 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 LGALS4P56470 323 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 GRM7Q14831 915 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 POLNQ7Z5Q5 900 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 ZNF808Q8N4W9 903 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 MSL3Q8N5Y2 521 aaKnown RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 KCTD10Q9H3F6 313 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 NELFAQ9H3P2 528 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 ING3Q9NXR8 418 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 IQGAP1P46940 1657 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 INO80Q9ULG1 1556 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 PLA2R1Q13018 1463 aa4.56□□□□□ -1.68
HMGB1P6-201ENST00000569046 A0A1W2PRX2 142 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 MAFGO15525 162 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 DAPK3O43293 454 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 FSBPO95073 299 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 VSIG10L2P0DP72 767 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 INSRRP14616 1297 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 ACO1P21399 889 aaKnown RBP4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 FSCN1Q16658 493 aaKnown RBP4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 IQSEC1Q6DN90 963 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 MAMDC4Q6UXC1 1216 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 DDX42Q86XP3 938 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 WDR66Q8TBY9 1149 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 TGFBRAP1Q8WUH2 860 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 LMBR1Q8WVP7 490 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 UIMC1Q96RL1 719 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 ADOQ96SZ5 270 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 WNT8AQ9H1J5 351 aa4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 C14orf93Q9H972 538 aaKnown RBP4.55□□□□□ -1.68
HMGB1P6-201ENST00000569046 SPC25Q9HBM1 224 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms