RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 KCNG1Q9UIX4 513 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 LRFN2Q9ULH4 789 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 PCDHA5Q9Y5H7 936 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 A0A0U1RQF3 1178 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 SLC34A2O95436 690 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
PKM-221ENST00000568743 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
PKM-221ENST00000568743 GATMP50440 423 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 FAM189BP81408 668 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
PKM-221ENST00000568743 ISM2Q6H9L7 571 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 SLC27A1Q6PCB7 646 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 EPM2AIP1Q7L775 607 aaPredicted RBP11.1□□□□□ -0.63
PKM-221ENST00000568743 MAP4K3Q8IVH8 894 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 HERC6Q8IVU3 1022 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 NELFCDQ8IXH7 590 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 SMARCE1Q969G3 411 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 TOP1MTQ969P6 601 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 APOL6Q9BWW8 343 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 TRIM6Q9C030 488 aaPredicted RBP11.1□□□□□ -0.63
PKM-221ENST00000568743 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 CLSTN2Q9H4D0 955 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
PKM-221ENST00000568743 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
PKM-221ENST00000568743 GDAQ9Y2T3 454 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 HES2Q9Y543 173 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 PCDHB7Q9Y5E2 793 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 PCDHB13Q9Y5F0 798 aa11.1□□□□□ -0.63
PKM-221ENST00000568743 ANKRD63C9JTQ0 380 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 BIN1O00499 593 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 HNRNPDLO14979 420 aaKnown RBP11.09□□□□□ -0.63
PKM-221ENST00000568743 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 SMC2O95347 1197 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 FGFR1P11362 822 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 MYOGP15173 224 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 HOXD13P35453 343 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 PBX2P40425 430 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 LIG4P49917 911 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 KCNB1Q14721 858 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 ZNF568Q3ZCX4 644 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 SLC39A4Q6P5W5 647 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 MPZL3Q6UWV2 235 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 ZNF598Q86UK7 904 aaKnown RBP11.09□□□□□ -0.63
PKM-221ENST00000568743 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 SMYD4Q8IYR2 804 aaPredicted RBP11.09□□□□□ -0.63
PKM-221ENST00000568743 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 CEP120Q8N960 986 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 SMG8Q8ND04 991 aaKnown RBP11.09□□□□□ -0.63
PKM-221ENST00000568743 PHOSPHO2Q8TCD6 241 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
PKM-221ENST00000568743 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 CCDC51Q96ER9 411 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 ADPGKQ9BRR6 497 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 TCHPQ9BT92 498 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 HAPLN2Q9GZV7 340 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 CDT1Q9H211 546 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 PTPRHQ9HD43 1115 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 IPPQ9Y573 584 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 LAMA2P24043 3122 aaKnown RBP11.09□□□□□ -0.63
PKM-221ENST00000568743 MICAL3Q7RTP6 2002 aa11.09□□□□□ -0.63
PKM-221ENST00000568743 MYH11P35749 1972 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 ZMYM2Q9UBW7 1377 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 ABLIM1O14639 778 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 EIF3DO15371 548 aaKnown RBP eCLIP11.08□□□□□ -0.64
PKM-221ENST00000568743 TLL1O43897 1013 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 TOM1L1O75674 476 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 GJB5O95377 273 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 STAG3L1P0CL83 205 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 SCP2P22307 547 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 PROZP22891 400 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 AKAP5P24588 427 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 RAB27AP51159 221 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 OSTNP61366 133 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 PSMD2Q13200 908 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 ALCAMQ13740 583 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
PKM-221ENST00000568743 SEZ6Q53EL9 994 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 ZPBP2Q6X784 338 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 AGMOQ6ZNB7 445 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 STXBP4Q6ZWJ1 553 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 ELOA2Q8IYF1 753 aaPredicted RBP11.08□□□□□ -0.64
PKM-221ENST00000568743 THNSL1Q8IYQ7 743 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 SPATA20Q8TB22 786 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 KCNN1Q92952 543 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 TRAIPQ9BWF2 469 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 NUP62CLQ9H1M0 184 aa11.08□□□□□ -0.64
PKM-221ENST00000568743 RNF19AQ9NV58 838 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms