RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 N4BP3O15049 544 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 MBTPS2O43462 519 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 DCXO43602 365 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
CDH3-206ENST00000567674 CTSAP10619 480 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
CDH3-206ENST00000567674 NDUFV1P49821 464 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
CDH3-206ENST00000567674 ITIH3Q06033 890 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 LARP1BQ659C4 914 aaKnown RBP12.38□□□□□ -0.43
CDH3-206ENST00000567674 CYP26C1Q6V0L0 522 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 CASP10Q92851 521 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 FAM193BQ96PV7 902 aaPredicted RBP12.38□□□□□ -0.43
CDH3-206ENST00000567674 TCF25Q9BQ70 676 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 RHOBTB2Q9BYZ6 727 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
CDH3-206ENST00000567674 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
CDH3-206ENST00000567674 H0YCG3 227 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 ARF4P18085 180 aaPredicted RBP12.37□□□□□ -0.43
CDH3-206ENST00000567674 GUCY2CP25092 1073 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 IRS1P35568 1242 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 NRIP1P48552 1158 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 ERVFC1P60507 584 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 ELMSAN1Q6PJG2 1045 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 RNF169Q8NCN4 708 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
CDH3-206ENST00000567674 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
CDH3-206ENST00000567674 MFSD14AQ96MC6 490 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 NECTIN4Q96NY8 510 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 ZBP1Q9H171 429 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
CDH3-206ENST00000567674 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 CLEC1BQ9P126 229 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 IPPQ9Y573 584 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 PCDHB6Q9Y5E3 794 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 ARID2Q68CP9 1835 aa12.37□□□□□ -0.43
CDH3-206ENST00000567674 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 C2orf71A6NGG8 1288 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 ARL5CA6NH57 179 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 H3BQ06 376 aaPredicted RBP12.36□□□□□ -0.43
CDH3-206ENST00000567674 USO1O60763 962 aaKnown RBP12.36□□□□□ -0.43
CDH3-206ENST00000567674 CREMQ03060 361 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 ZP2Q05996 745 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 DSC1Q08554 894 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 CBX2Q14781 532 aaPredicted RBP12.36□□□□□ -0.43
CDH3-206ENST00000567674 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 SUSD6Q92537 303 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 COLEC11Q9BWP8 271 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 EMILIN2Q9BXX0 1053 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 CCDC113Q9H0I3 377 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
CDH3-206ENST00000567674 KIAA1024Q9UPX6 916 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 KIAA1671Q9BY89 1806 aa12.36□□□□□ -0.43
CDH3-206ENST00000567674 LRRIQ4A6NIV6 560 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 ZC3H11AO75152 810 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH3-206ENST00000567674 TBX10O75333 385 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 PAPLNO95428 1278 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 CXCL14O95715 111 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 GLP2RO95838 553 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 EFEMP2O95967 443 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 LONP1P36776 959 aaKnown RBP12.35□□□□□ -0.43
CDH3-206ENST00000567674 GRIK3Q13003 919 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 PRPF4BQ13523 1007 aaKnown RBP12.35□□□□□ -0.43
CDH3-206ENST00000567674 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 ANKRD54Q6NXT1 300 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 RTL10Q7L3V2 364 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 ADGRD2Q7Z7M1 963 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 RNF168Q8IYW5 571 aaPredicted RBP12.35□□□□□ -0.43
CDH3-206ENST00000567674 VPS52Q8N1B4 723 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 SYT2Q8N9I0 419 aaPredicted RBP12.35□□□□□ -0.43
CDH3-206ENST00000567674 DEPTORQ8TB45 409 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 SPIRE2Q8WWL2 714 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 TSPAN18Q96SJ8 248 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 PHOX2BQ99453 314 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 PHF7Q9BWX1 381 aaPredicted RBP12.35□□□□□ -0.43
CDH3-206ENST00000567674 IGFLR1Q9H665 355 aa12.35□□□□□ -0.43
CDH3-206ENST00000567674 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH3-206ENST00000567674 K7ERI5 159 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 NRP1O14786 923 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 DTNBO60941 627 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 LILRB3O75022 631 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 SOD2P04179 222 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 IL9P15248 144 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 FOSBP53539 338 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 SMTNP53814 917 aa12.34□□□□□ -0.43
CDH3-206ENST00000567674 PTPN5P54829 565 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms