RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SFR1Q86XK3 245 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 DEFB123Q8N688 67 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 TTYH1Q9H313 450 aaPredicted RBP28.72■■■□□ 2.19
NME3-209ENST00000566600 ST6GALNAC4Q9H4F1 302 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 PDZD7Q9H5P4 517 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 UBN1Q9NPG3 1134 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 FGFR1P11362 822 aa28.71■■■□□ 2.19
NME3-209ENST00000566600 HERC4Q5GLZ8 1057 aaPredicted RBP28.71■■■□□ 2.19
NME3-209ENST00000566600 CCDC34Q96HJ3 373 aa28.71■■■□□ 2.19
NME3-209ENST00000566600 SAMD11Q96NU1 681 aa28.71■■■□□ 2.19
NME3-209ENST00000566600 TGS1Q96RS0 853 aaKnown RBP28.71■■■□□ 2.19
NME3-209ENST00000566600 EIF2AQ9BY44 585 aaKnown RBP28.71■■■□□ 2.19
NME3-209ENST00000566600 OLFML3Q9NRN5 406 aa28.71■■■□□ 2.19
NME3-209ENST00000566600 TNFSF13BQ9Y275 285 aa28.71■■■□□ 2.19
NME3-209ENST00000566600 IPPQ9Y573 584 aa28.71■■■□□ 2.19
NME3-209ENST00000566600 TTLL13PA6NNM8 815 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 TBKBP1A7MCY6 615 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 NPTXRO95502 500 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 EDN1P05305 212 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 MYL1P05976 194 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 ITGA4P13612 1032 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 ASIC1P78348 528 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 DCAF4L1Q3SXM0 396 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 LONRF3Q496Y0 759 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 GLB1LQ6UWU2 654 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 FIZ1Q96SL8 496 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 ACO2Q99798 780 aaKnown RBP28.7■■■□□ 2.18
NME3-209ENST00000566600 GOLPH3LQ9H4A5 285 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 MRPL44Q9H9J2 332 aaKnown RBP28.7■■■□□ 2.18
NME3-209ENST00000566600 RWDD3Q9Y3V2 267 aa28.7■■■□□ 2.18
NME3-209ENST00000566600 AFMP43652 599 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 GATMP50440 423 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 ERVK-21P61565 698 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 GTF2BQ00403 316 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 PAN2Q504Q3 1202 aaKnown RBP28.69■■■□□ 2.18
NME3-209ENST00000566600 ZPBP2Q6X784 338 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 ZNF720Q7Z2F6 126 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 CDR2LQ86X02 465 aaPredicted RBP28.69■■■□□ 2.18
NME3-209ENST00000566600 SMG8Q8ND04 991 aaKnown RBP28.69■■■□□ 2.18
NME3-209ENST00000566600 PAGE5Q96GU1 130 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 RNF19AQ9NV58 838 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 TBX20Q9UMR3 447 aa28.69■■■□□ 2.18
NME3-209ENST00000566600 CHD9Q3L8U1 2897 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 NMT1P30419 496 aaKnown RBP28.68■■■□□ 2.18
NME3-209ENST00000566600 ALCAMQ13740 583 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 CLLU1OSQ5K130 101 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 TMEM87AQ8NBN3 555 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 HELQQ8TDG4 1101 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 LPPQ93052 612 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 HVCN1Q96D96 273 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 CASD1Q96PB1 797 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 TARS2Q9BW92 718 aaKnown RBP28.68■■■□□ 2.18
NME3-209ENST00000566600 MRPL9Q9BYD2 267 aaKnown RBP28.68■■■□□ 2.18
NME3-209ENST00000566600 USP20Q9Y2K6 914 aa28.68■■■□□ 2.18
NME3-209ENST00000566600 ARHGEF15O94989 841 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 ZNF202O95125 648 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 KANK3Q6NY19 840 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 Q7L0L9 218 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 CLP1Q92989 425 aaKnown RBP28.67■■■□□ 2.18
NME3-209ENST00000566600 BICD1Q96G01 975 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 RSAD1Q9HA92 442 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 PCDHB13Q9Y5F0 798 aa28.67■■■□□ 2.18
NME3-209ENST00000566600 FNDC1Q4ZHG4 1894 aaPredicted RBP28.67■■■□□ 2.18
NME3-209ENST00000566600 PVALEFA0A1B0GWK0 134 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 TOM1L1O75674 476 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 COASYQ13057 564 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 EEF1DP3Q658K8 133 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 AGMOQ6ZNB7 445 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 KRBA2Q6ZNG9 492 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 STXBP4Q6ZWJ1 553 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 UNC13DQ70J99 1090 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 LRRC43Q8N309 656 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 FAM161BQ96MY7 647 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 TCHPQ9BT92 498 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 BLZF1Q9H2G9 400 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 NXF3Q9H4D5 531 aaKnown RBP28.66■■■□□ 2.18
NME3-209ENST00000566600 PTPRHQ9HD43 1115 aa28.66■■■□□ 2.18
NME3-209ENST00000566600 ZMYM2Q9UBW7 1377 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 FAM160A1Q05DH4 1040 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 CUL4BQ13620 913 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 ZNF568Q3ZCX4 644 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 MPZL3Q6UWV2 235 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 MAP4K3Q8IVH8 894 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 URGCPQ8TCY9 931 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 AAASQ9NRG9 546 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 TBC1D7Q9P0N9 293 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 KANSL3Q9P2N6 904 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 GIT1Q9Y2X7 761 aa28.65■■■□□ 2.18
NME3-209ENST00000566600 MRPL42Q9Y6G3 142 aaKnown RBP28.65■■■□□ 2.18
NME3-209ENST00000566600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.64■■■□□ 2.18
NME3-209ENST00000566600 HNRNPDLO14979 420 aaKnown RBP28.64■■■□□ 2.18
NME3-209ENST00000566600 GTPBP6O43824 516 aaPredicted RBP28.64■■■□□ 2.18
NME3-209ENST00000566600 OFD1O75665 1012 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 GCNT3O95395 438 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 PIGRP01833 764 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 MCF2P10911 925 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 PROZP22891 400 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 LIG4P49917 911 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 GRIN2CQ14957 1233 aa28.64■■■□□ 2.18
NME3-209ENST00000566600 NOMO2Q5JPE7 1267 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms