RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 USP20Q9Y2K6 914 aa18.32■□□□□ 0.52
RAB40C-210ENST00000566290 FRMD4BQ9Y2L6 1034 aa18.32■□□□□ 0.52
RAB40C-210ENST00000566290 MYH9P35579 1960 aaKnown RBP18.31■□□□□ 0.52
RAB40C-210ENST00000566290 MYO9BQ13459 2157 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 DOCK5Q9H7D0 1870 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 N4BP1O75113 896 aaKnown RBP18.31■□□□□ 0.52
RAB40C-210ENST00000566290 LGR5O75473 907 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 NOL4O94818 638 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 SMPD1P17405 629 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 EPHB4P54760 987 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 SP2Q02086 613 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 KCNA1Q09470 495 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 MTF1Q14872 753 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 SMYD5Q6GMV2 418 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 CCSAPQ6IQ19 270 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-210ENST00000566290 SWSAP1Q6NVH7 229 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 INTS8Q75QN2 995 aaKnown RBP18.31■□□□□ 0.52
RAB40C-210ENST00000566290 EHBP1Q8NDI1 1231 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 KLHDC9Q8NEP7 349 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 VTI1AQ96AJ9 217 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 PCMTD1Q96MG8 357 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-210ENST00000566290 ASB2Q96Q27 587 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 CEP89Q96ST8 783 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 XPNPEP1Q9NQW7 623 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 AIPL1Q9NZN9 384 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 ARHGAP28Q9P2N2 729 aa18.31■□□□□ 0.52
RAB40C-210ENST00000566290 RBAK-RBAKDNI3L0D1 243 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 DUSP11O75319 330 aaKnown RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 IPO7O95373 1038 aaKnown RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 KLK7P49862 253 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 TRIM60Q495X7 471 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 CCDC62Q6P9F0 684 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 GBP6Q6ZN66 633 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 ATXN2LQ8WWM7 1075 aaKnown RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 SEPT1Q8WYJ6 367 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 FAM207AQ9NSI2 230 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 DDX41Q9UJV9 622 aaKnown RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 PHF24Q9UPV7 400 aa18.3■□□□□ 0.52
RAB40C-210ENST00000566290 GNEQ9Y223 722 aaKnown RBP18.3■□□□□ 0.52
RAB40C-210ENST00000566290 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 RBM47A0AV96 593 aaKnown RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 RIOK3O14730 519 aaKnown RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 EPHB6O15197 1021 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 PIGRP01833 764 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 UQCRHP07919 91 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 ITGB8P26012 769 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 NPTX2P47972 431 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 NPEPPSP55786 919 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 BFSP1Q12934 665 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 EXOC3L4Q17RC7 722 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 BRDTQ58F21 947 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 PLA2G4FQ68DD2 849 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 CYFIP1Q7L576 1253 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 PLPPR4Q7Z2D5 763 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 CACNA2D4Q7Z3S7 1137 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 FBXL18Q96ME1 805 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 UHRF1Q96T88 793 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 UPF3AQ9H1J1 476 aaKnown RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 BCAS3Q9H6U6 928 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 NRBP2Q9NSY0 501 aa18.29■□□□□ 0.52
RAB40C-210ENST00000566290 BZW2Q9Y6E2 419 aaKnown RBP18.29■□□□□ 0.52
RAB40C-210ENST00000566290 KIF5CO60282 957 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 GARTP22102 1010 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 PRKCIP41743 596 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 ARHGAP25P42331 645 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 CASP4P49662 377 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 GJA9P57773 515 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 BEX3Q00994 111 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 KCNA10Q16322 511 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 ASTE1Q2TB18 679 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-210ENST00000566290 ARHGAP29Q52LW3 1261 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 CELF3Q5SZQ8 465 aaKnown RBP18.28■□□□□ 0.52
RAB40C-210ENST00000566290 RNF180Q86T96 592 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 XXYLT1Q8NBI6 393 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 CHP1Q99653 195 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 DESI2Q9BSY9 194 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
RAB40C-210ENST00000566290 TSGA10Q9BZW7 698 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 NHEJ1Q9H9Q4 299 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-210ENST00000566290 VTA1Q9NP79 307 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 SEPT9Q9UHD8 586 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-210ENST00000566290 DNAI1Q9UI46 699 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 TBX20Q9UMR3 447 aa18.28■□□□□ 0.52
RAB40C-210ENST00000566290 REXO2Q9Y3B8 237 aaKnown RBP18.28■□□□□ 0.52
RAB40C-210ENST00000566290 A0A1W2PQ45 241 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-210ENST00000566290 A0A1W2PQY0 241 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 LRRC53A6NM62 1247 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 GFPT2O94808 682 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 SERPING1P05155 500 aa18.27■□□□□ 0.52
RAB40C-210ENST00000566290 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-210ENST00000566290 ATP4AP20648 1035 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms