RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 FBRSQ9HAH7 460 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 PLAGL2Q9UPG8 496 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 CD2APQ9Y5K6 639 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 NUMBLQ9Y6R0 609 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ABCB11O95342 1321 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 SLIT3O75094 1523 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 IQCA1LA6NCM1 817 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 KCNQ3O43525 872 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ANXA1P04083 346 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 DCTN2Q13561 401 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 MTFR1Q15390 333 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 SAFBQ15424 915 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-218ENST00000566029 SMAD1Q15797 465 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 INAQ16352 499 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 RASGEF1CQ8N431 466 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ART4Q93070 314 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 PPP1R14AQ96A00 147 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 HPS4Q9NQG7 708 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ARL8BQ9NVJ2 186 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 LARSQ9P2J5 1176 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 FBXO9Q9UK97 447 aaPredicted RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 DCCP43146 1447 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8CPA6NN73 597 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 NBPF26B4DH59 902 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 RHOBTB3O94955 611 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 HSPA8P11142 646 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 ITGA4P13612 1032 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ACAD11Q709F0 780 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 VPS52Q8N1B4 723 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 STAG2Q8N3U4 1231 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 TRIML2Q8N7C3 387 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 SELENOSQ9BQE4 189 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 MYL10Q9BUA6 226 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 GRHL1Q9NZI5 618 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 GGT7Q9UJ14 662 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 CCPG1Q9ULG6 757 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ANGEL1Q9UNK9 670 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 LZTS1Q9Y250 596 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 TRIM49BA6NDI0 452 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 LRRC53A6NM62 1247 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ZBED1O96006 694 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 KRT7P08729 469 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 PDE1BQ01064 536 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 NUDCD3Q8IVD9 361 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 UBLCP1Q8WVY7 318 aaPredicted RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 SEZ6LQ9BYH1 1024 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 RSPH9Q9H1X1 276 aaPredicted RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 AGPAT5Q9NUQ2 364 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 TACC3Q9Y6A5 838 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 SPATA31A3Q5VYP0 1347 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 PREX1Q8TCU6 1659 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 UBE2Q2LH0YL09 131 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ENTPD5O75356 428 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 GNAT2P19087 354 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 METAP2P50579 478 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-218ENST00000566029 PFKPQ01813 784 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 KCNC4Q03721 635 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 GPATCH4Q5T3I0 446 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 PATL1Q86TB9 770 aaKnown RBP3.11□□□□□ -1.91
CHD9-218ENST00000566029 NUP93Q8N1F7 819 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 C4orf32Q8N8J7 132 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 HAUS1Q96CS2 278 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 TRIM39Q9HCM9 518 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ZDHHC7Q9NXF8 308 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 ZNF212Q9UDV6 495 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 TELO2Q9Y4R8 837 aa3.11□□□□□ -1.91
CHD9-218ENST00000566029 PGRMC1O00264 195 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 AQP9O43315 295 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SUPT3HO75486 399 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CALM1P0DP23 149 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CALM2P0DP24 149 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CALM3P0DP25 149 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 TAC1P20366 129 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CLCN2P51788 898 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PMS2P54278 862 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 RRP1BQ14684 758 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 PROSER3Q2NL68 480 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ANO4Q32M45 955 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SLC45A4Q5BKX6 768 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ZNF658Q5TYW1 1059 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 IL23RQ5VWK5 629 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 CRAMP1Q96RY5 1269 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 DCLRE1BQ9H816 532 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 OLFML3Q9NRN5 406 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 C1orf167Q5SNV9 1468 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8QA0A0J9YX86 632 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SSU72P8A0A1W2PR75 194 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 TLDC2A0PJX2 215 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8OA6NCC3 632 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 FAM187AA6NFU0 413 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 NUTM2BA6NNL0 878 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 NUTM2EB1AL46 878 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8NF8WBI6 632 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 KDM1AO60341 852 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PYGMP11217 842 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 KRT10P13645 584 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 FOXN2P32314 431 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PTGIRP43119 386 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PTDSS1P48651 473 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 GALK1P51570 392 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms