RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FAM187BQ17R55 369 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 TMC6Q7Z403 805 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 VSTM4Q8IW00 320 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 ACO2Q99798 780 aaKnown RBP20.47■□□□□ 0.87
COMMD4-213ENST00000565834 GCOM2Q9BZD3 368 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-213ENST00000565834 NDST4Q9H3R1 872 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 ANKFY1Q9P2R3 1169 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 PHF24Q9UPV7 400 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 GINS2Q9Y248 185 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 KIAA0391O15091 583 aaKnown RBP20.46■□□□□ 0.87
COMMD4-213ENST00000565834 PPP2R3AQ06190 1150 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 TMEM132AQ24JP5 1023 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 SERINC5Q86VE9 423 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 RDH13Q8NBN7 331 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 SAAL1Q96ER3 474 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 BORCS6Q96GS4 357 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 PRIMPOLQ96LW4 560 aa20.46■□□□□ 0.87
COMMD4-213ENST00000565834 GOLGA8IPA6NC78 632 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 GOLGA8JA6NMD2 632 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 TTLL13PA6NNM8 815 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 GOLGA6L6A8MZA4 724 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 DNM1LO00429 736 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 MAPK13O15264 365 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 CSDE1O75534 798 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 TOM1L1O75674 476 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 RPLP2P05387 115 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 PTMAP06454 111 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 IQCF3P0C7M6 154 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 PKN2Q16513 984 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 PTGISQ16647 500 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 PTPN21Q16825 1174 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 FKBP15Q5T1M5 1219 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 GPD1LQ8N335 351 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 ZBTB45Q96K62 511 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 STARD7Q9NQZ5 370 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 AGO2Q9UKV8 859 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 CLDN3O15551 220 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 B4GALT5O43286 388 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 KRT13P13646 458 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 HSP90AA2PQ14568 343 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 SNRNP35Q16560 246 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 DCAF17Q5H9S7 520 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 ATF7IP2Q5U623 682 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 TSHZ1Q6ZSZ6 1077 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 INTS8Q75QN2 995 aaKnown RBP20.45■□□□□ 0.86
COMMD4-213ENST00000565834 ZSWIM2Q8NEG5 633 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 FBXL18Q96ME1 805 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 OSMRQ99650 979 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 MSTO1Q9BUK6 570 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 OGDHLQ9ULD0 1010 aa20.45■□□□□ 0.86
COMMD4-213ENST00000565834 CNTNAP2Q9UHC6 1331 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 A0A0B4J269 797 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-213ENST00000565834 M0QZ92 97 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 ERLIN2O94905 339 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 PBX1P40424 430 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 AMHR2Q16671 573 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 TCERG1LQ5VWI1 586 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 SPECC1LQ69YQ0 1117 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 ZNF333Q96JL9 665 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 TCHPQ9BT92 498 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 HAPLN2Q9GZV7 340 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 CDHR5Q9HBB8 845 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 KIAA1586Q9HCI6 787 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 DNAH12Q6ZR08 3092 aa20.44■□□□□ 0.86
COMMD4-213ENST00000565834 EXTL3O43909 919 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 LDHAP00338 332 aaKnown RBP20.43■□□□□ 0.86
COMMD4-213ENST00000565834 DARSP14868 501 aaKnown RBP20.43■□□□□ 0.86
COMMD4-213ENST00000565834 CRYBB1P53674 252 aaPredicted RBP20.43■□□□□ 0.86
COMMD4-213ENST00000565834 MRPS6P82932 125 aaKnown RBP20.43■□□□□ 0.86
COMMD4-213ENST00000565834 BFSP1Q12934 665 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 MPZL3Q6UWV2 235 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 CBWD2Q8IUF1 395 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 SLC35C1Q96A29 364 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 FAM213AQ9BRX8 229 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 IMPACTQ9P2X3 320 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 TNFSF13BQ9Y275 285 aa20.43■□□□□ 0.86
COMMD4-213ENST00000565834 A0A1W2PQC6 194 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 AFPP02771 609 aaKnown RBP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 ADRB2P07550 413 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 HARSP12081 509 aaKnown RBP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 PROZP22891 400 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 EIF4BP23588 611 aaKnown RBP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 KCNH2Q12809 1159 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 PCBP1Q15365 356 aaKnown RBP eCLIP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 ZBTB33Q86T24 672 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 RPAINQ86UA6 219 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 CELF4Q9BZC1 486 aaKnown RBP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 ABLIM1O14639 778 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 TSPAN1O60635 241 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 MCL1Q07820 350 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 PTK7Q13308 1070 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 SNX17Q15036 470 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 ZNF568Q3ZCX4 644 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 CATSPER4Q7RTX7 472 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 SLC43A3Q8NBI5 491 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 WNT8BQ93098 351 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms