RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 LMCD1Q9NZU5 365 aa28.56■■■□□ 2.16
NME3-208ENST00000565379 SFI1A8K8P3 1242 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 TRAK2O60296 914 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 RPS6KA5O75582 802 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 LINC00271P0C7V0 271 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 IBSPP21815 317 aaPredicted RBP28.55■■■□□ 2.16
NME3-208ENST00000565379 KCNQ1P51787 676 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 CUL4BQ13620 913 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 HERC4Q5GLZ8 1057 aaPredicted RBP28.55■■■□□ 2.16
NME3-208ENST00000565379 GRAMD1CQ8IYS0 662 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 POLD4Q9HCU8 107 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 OLFML3Q9NRN5 406 aa28.55■■■□□ 2.16
NME3-208ENST00000565379 NOC2LQ9Y3T9 749 aaKnown RBP28.55■■■□□ 2.16
NME3-208ENST00000565379 MGEA5O60502 916 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 COL9A1P20849 921 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 PAK2Q13177 524 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 FAM178BQ8IXR5 827 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 HLA-CQ95604 372 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 BLZF1Q9H2G9 400 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 TMEM134Q9H6X4 195 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 ARHGAP28Q9P2N2 729 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 NLRC5Q86WI3 1866 aa28.54■■■□□ 2.16
NME3-208ENST00000565379 SMC2O95347 1197 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 GATMP50440 423 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 NCKAP1LP55160 1127 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 DPYDQ12882 1025 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 TMEM192Q8IY95 271 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 ZNF668Q96K58 619 aaPredicted RBP28.53■■■□□ 2.16
NME3-208ENST00000565379 PRIMPOLQ96LW4 560 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 NECAB3Q96P71 396 aaPredicted RBP28.53■■■□□ 2.16
NME3-208ENST00000565379 ST6GALNAC4Q9H4F1 302 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 ERVK-5Q9HDB9 667 aa28.53■■■□□ 2.16
NME3-208ENST00000565379 PRMT7Q9NVM4 692 aaPredicted RBP28.53■■■□□ 2.16
NME3-208ENST00000565379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.52■■■□□ 2.16
NME3-208ENST00000565379 INO80B-WBP1J3KQ70 363 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 NCBP1Q09161 790 aaKnown RBP28.52■■■□□ 2.16
NME3-208ENST00000565379 COASYQ13057 564 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 PSMD2Q13200 908 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 ALCAMQ13740 583 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 MAPK6Q16659 721 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 STXBP4Q6ZWJ1 553 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 CRIPAKQ8N1N5 446 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 FTHL17Q9BXU8 183 aa28.52■■■□□ 2.16
NME3-208ENST00000565379 GTPBP4Q9BZE4 634 aaKnown RBP28.52■■■□□ 2.16
NME3-208ENST00000565379 ADGRA3Q8IWK6 1321 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 K7ERI5 159 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 NFX1Q12986 1120 aaKnown RBP28.51■■■□□ 2.15
NME3-208ENST00000565379 FAM187BQ17R55 369 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 PPP4R3CPQ6ZMV5 832 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 SFR1Q86XK3 245 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 TMEM161BQ8NDZ6 487 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 MRPL44Q9H9J2 332 aaKnown RBP28.51■■■□□ 2.15
NME3-208ENST00000565379 RMND1Q9NWS8 449 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 ST3GAL5Q9UNP4 418 aa28.51■■■□□ 2.15
NME3-208ENST00000565379 ERLIN2O94905 339 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 RPN1P04843 607 aaKnown RBP28.5■■■□□ 2.15
NME3-208ENST00000565379 AXLP30530 894 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 MBTD1Q05BQ5 628 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 KCNB1Q14721 858 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 CATSPER4Q7RTX7 472 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 FAM228AQ86W67 206 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 FIBCD1Q8N539 461 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 ZNF689Q96CS4 500 aaPredicted RBP28.5■■■□□ 2.15
NME3-208ENST00000565379 HVCN1Q96D96 273 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 GSDMAQ96QA5 445 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 FZD8Q9H461 694 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 CHST12Q9NRB3 414 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 EXOC1Q9NV70 894 aa28.5■■■□□ 2.15
NME3-208ENST00000565379 K7ENM7 598 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 SLC16A4O15374 487 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 KLRC4O43908 158 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 PRR29P0C7W0 189 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 CASP1P29466 404 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 CTNNB1P35222 781 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 EHHADHQ08426 723 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 STRN3Q13033 797 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 GPM6BQ13491 265 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 ZNF720Q7Z2F6 126 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 HAUS6Q7Z4H7 955 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 GPT2Q8TD30 523 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 FIZ1Q96SL8 496 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 CLSTN2Q9H4D0 955 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 PCDHB13Q9Y5F0 798 aa28.49■■■□□ 2.15
NME3-208ENST00000565379 DGKIO75912 1065 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 GTF2BQ00403 316 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 PNOCQ13519 176 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 PAN2Q504Q3 1202 aaKnown RBP28.48■■■□□ 2.15
NME3-208ENST00000565379 FAM26FQ5R3K3 315 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 SPATA20Q8TB22 786 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 SMARCE1Q969G3 411 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 KIFC3Q9BVG8 833 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 CCDC113Q9H0I3 377 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 MINDY3Q9H8M7 445 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 MYH11P35749 1972 aa28.48■■■□□ 2.15
NME3-208ENST00000565379 DENND3A2RUS2 1198 aa28.47■■■□□ 2.15
NME3-208ENST00000565379 H3BNC9 293 aa28.47■■■□□ 2.15
NME3-208ENST00000565379 ACKR2O00590 384 aa28.47■■■□□ 2.15
NME3-208ENST00000565379 RHOBTB3O94955 611 aa28.47■■■□□ 2.15
NME3-208ENST00000565379 BTG3Q14201 252 aaPredicted RBP28.47■■■□□ 2.15
NME3-208ENST00000565379 KMT5BQ4FZB7 885 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms