RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CTSAP10619 480 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 ITGA4P13612 1032 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 ALADP13716 330 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 PTGDRQ13258 359 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 CBX2Q14781 532 aaPredicted RBP11.12□□□□□ -0.63
CMTM3-209ENST00000565003 HAUS3Q68CZ6 603 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
CMTM3-209ENST00000565003 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 RNF135Q8IUD6 432 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 MCPH1Q8NEM0 835 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 TMX3Q96JJ7 454 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 GAD1Q99259 594 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 TMEM175Q9BSA9 504 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 APOL6Q9BWW8 343 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 APOL5Q9BWW9 433 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 PHF7Q9BWX1 381 aaPredicted RBP11.12□□□□□ -0.63
CMTM3-209ENST00000565003 MIOSQ9NXC5 875 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 KANSL3Q9P2N6 904 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 CDH22Q9UJ99 828 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 IRAK3Q9Y616 596 aa11.12□□□□□ -0.63
CMTM3-209ENST00000565003 A0A1B0GUA9 196 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 ARHGEF35A5YM69 484 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 CARNS1A5YM72 827 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 NRP1O14786 923 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 NPTXRO95502 500 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 EDN1P05305 212 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 CYP11B2P19099 503 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 AKAP5P24588 427 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 CCT6AP40227 531 aaKnown RBP11.11□□□□□ -0.63
CMTM3-209ENST00000565003 SCNN1GP51170 649 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 DSC1Q08554 894 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 NCBP1Q09161 790 aaKnown RBP11.11□□□□□ -0.63
CMTM3-209ENST00000565003 PTPN14Q15678 1187 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 IL17AQ16552 155 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 COLGALT2Q8IYK4 626 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 GSTCDQ8NEC7 633 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 CASP10Q92851 521 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 FAM193BQ96PV7 902 aaPredicted RBP11.11□□□□□ -0.63
CMTM3-209ENST00000565003 TRIM6Q9C030 488 aaPredicted RBP11.11□□□□□ -0.63
CMTM3-209ENST00000565003 BHMT2Q9H2M3 363 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 UBN1Q9NPG3 1134 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 MARCH5Q9NX47 278 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 LRWD1Q9UFC0 647 aa11.11□□□□□ -0.63
CMTM3-209ENST00000565003 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 PRR33A8MZF0 331 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 F8W810 466 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 ALDH2P05091 517 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 SSBP05455 408 aaKnown RBP eCLIP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 EPCAMP16422 314 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 HOXB8P17481 243 aaPredicted RBP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 MUTP22033 750 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 PDIA5Q14554 519 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 BMS1Q14692 1282 aaKnown RBP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 FAM187BQ17R55 369 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 HERC4Q5GLZ8 1057 aaPredicted RBP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 SLC27A1Q6PCB7 646 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 FEZF2Q8TBJ5 459 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 SNX29Q8TEQ0 813 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 RPGRIP1Q96KN7 1286 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 FZD8Q9H461 694 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 DDX19AQ9NUU7 478 aaKnown RBP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 KIAA1024Q9UPX6 916 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 FAN1Q9Y2M0 1017 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 GIT1Q9Y2X7 761 aa11.1□□□□□ -0.63
CMTM3-209ENST00000565003 PRG3Q9Y2Y8 225 aaPredicted RBP11.1□□□□□ -0.63
CMTM3-209ENST00000565003 TECTAO75443 2155 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 LAD1O00515 517 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 LILRB3O75022 631 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 SP100P23497 879 aaPredicted RBP11.09□□□□□ -0.63
CMTM3-209ENST00000565003 GJB2P29033 226 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 CDC25AP30304 524 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 NAMPTP43490 491 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 OR1G1P47890 313 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 GIT2Q14161 759 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 MCTP1Q6DN14 999 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 KANK3Q6NY19 840 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
CMTM3-209ENST00000565003 C12orf76Q8N812 135 aaPredicted RBP11.09□□□□□ -0.63
CMTM3-209ENST00000565003 SLC22A17Q8WUG5 538 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 PDZD7Q9H5P4 517 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
CMTM3-209ENST00000565003 PRMT7Q9NVM4 692 aaPredicted RBP11.09□□□□□ -0.63
CMTM3-209ENST00000565003 KLK14Q9P0G3 267 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 CACNG4Q9UBN1 327 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 KIF3AQ9Y496 699 aa11.09□□□□□ -0.63
CMTM3-209ENST00000565003 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
CMTM3-209ENST00000565003 E9PMD0 336 aa11.08□□□□□ -0.64
CMTM3-209ENST00000565003 EFEMP2O95967 443 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms