RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 CETN1Q12798 172 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 NOP9Q86U38 636 aaKnown RBP16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 HOOK3Q86VS8 718 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 LDHDQ86WU2 507 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 XPO6Q96QU8 1125 aaKnown RBP16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 MXRA8Q9BRK3 442 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 EHMT1Q9H9B1 1298 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 LARSQ9P2J5 1176 aaKnown RBP16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 GOLGA6L7A0A1B0GV03 622 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CLRN2A0PK11 232 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 RTN2O75298 545 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 DRD4P21917 467 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CTNNA2P26232 953 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 IFI35P80217 286 aaPredicted RBP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 ERMARDQ5T6L9 678 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CCDC137Q6PK04 289 aaKnown RBP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 MIER3Q7Z3K6 550 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CACNA2D3Q8IZS8 1091 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CHURC1Q8WUH1 139 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CNOT10Q9H9A5 744 aaKnown RBP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 HSPBP1Q9NZL4 362 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CYP26A1O43174 497 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CTNND1O60716 968 aaKnown RBP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CHN1P15882 459 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 LLGL1Q15334 1064 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CLUL1Q15846 466 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 SLC47A2Q86VL8 602 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 EPS8L1Q8TE68 723 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 AZI2Q9H6S1 392 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 TMEM206Q9H813 350 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 KCNH7Q9NS40 1196 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 PCYOX1Q9UHG3 505 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 PCDHA3Q9Y5H8 950 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 TMEM150BA6NC51 233 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 GOLGA8IPA6NC78 632 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 GOLGA8JA6NMD2 632 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 SF3A3Q12874 501 aaKnown RBP eCLIP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 GKAP1Q5VSY0 366 aaPredicted RBP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 XXYLT1Q8NBI6 393 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 CCDC114Q96M63 670 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 RPS6KC1Q96S38 1066 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 ADAM7Q9H2U9 754 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 TRPC6Q9Y210 931 aa16.66■□□□□ 0.26
GTF3C1-205ENST00000564747 PFASO15067 1338 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 ANKRD63C9JTQ0 380 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 KCNJ1P48048 391 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 SMTNP53814 917 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 DRP2Q13474 957 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 PPM1KQ8N3J5 372 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 CHMP6Q96FZ7 201 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 PGM2Q96G03 612 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 AGBL1Q96MI9 1066 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 KREMEN1Q96MU8 473 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 RIT2Q99578 217 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 SELENOSQ9BQE4 189 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 NOCTQ9UK39 431 aaKnown RBP16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 ATP2C2O75185 946 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 MMEP08473 750 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 FGFR4P22455 802 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 TCEAL1Q15170 157 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 CD101Q93033 1021 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 ELMO3Q96BJ8 720 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 JPH2Q9BR39 696 aaPredicted RBP16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 COL20A1Q9P218 1284 aa16.65■□□□□ 0.26
GTF3C1-205ENST00000564747 PODXLO00592 558 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 P4HA2O15460 535 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 RASSF9O75901 435 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 HSPA6P17066 643 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 ANKRD20A8PQ5CZ79 823 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 CCDC105Q8IYK2 499 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 FAM71AQ8IYT1 594 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 CENPTQ96BT3 561 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 GLIS2Q9BZE0 524 aaPredicted RBP16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 FAM129AQ9BZQ8 928 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 SLC40A1Q9NP59 571 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 GPRC5CQ9NQ84 441 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 KLC4Q9NSK0 619 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 RGS16O15492 202 aaPredicted RBP16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 DHX15O43143 795 aaKnown RBP16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 ADRB2P07550 413 aa16.64■□□□□ 0.25
GTF3C1-205ENST00000564747 PLS3P13797 630 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms