RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PADI6Q6TGC4 694 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 DDX53Q86TM3 631 aaKnown RBP19.59■□□□□ 0.73
NME3-205ENST00000563854 RNF135Q8IUD6 432 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 ZBTB8OSQ8IWT0 167 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 HACE1Q8IYU2 909 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 CASP10Q92851 521 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 GAD1Q99259 594 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 UBN1Q9NPG3 1134 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 KANSL3Q9P2N6 904 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 LRWD1Q9UFC0 647 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 FAN1Q9Y2M0 1017 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 PRG3Q9Y2Y8 225 aaPredicted RBP19.59■□□□□ 0.73
NME3-205ENST00000563854 PCDHB6Q9Y5E3 794 aa19.59■□□□□ 0.73
NME3-205ENST00000563854 CLASP2O75122 1294 aaKnown RBP19.58■□□□□ 0.72
NME3-205ENST00000563854 U2AF2P26368 475 aaKnown RBP eCLIP19.58■□□□□ 0.72
NME3-205ENST00000563854 OR1G1P47890 313 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 SCNN1GP51170 649 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 PTGDRQ13258 359 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 KCNC3Q14003 757 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 SYCE2Q6PIF2 218 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 SNX29Q8TEQ0 813 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 ZFP42Q96MM3 310 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 PHF7Q9BWX1 381 aaPredicted RBP19.58■□□□□ 0.72
NME3-205ENST00000563854 NFKBIZQ9BYH8 718 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 CDH22Q9UJ99 828 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 HCN4Q9Y3Q4 1203 aa19.58■□□□□ 0.72
NME3-205ENST00000563854 ARL5CA6NH57 179 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 NRP1O14786 923 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 ALDH2P05091 517 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 CTSAP10619 480 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 AKAP5P24588 427 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 TOB1P50616 345 aaPredicted RBP19.57■□□□□ 0.72
NME3-205ENST00000563854 FXR2P51116 673 aaKnown RBP eCLIP19.57■□□□□ 0.72
NME3-205ENST00000563854 CBX2Q14781 532 aaPredicted RBP19.57■□□□□ 0.72
NME3-205ENST00000563854 SLC27A1Q6PCB7 646 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 TMEM184AQ6ZMB5 413 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 C4orf32Q8N8J7 132 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 DEPTORQ8TB45 409 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 BSNDQ8WZ55 320 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 TMX3Q96JJ7 454 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 TMEM175Q9BSA9 504 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 VN1R3Q9BXE9 311 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 POLD4Q9HCU8 107 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 PARP2Q9UGN5 583 aa19.57■□□□□ 0.72
NME3-205ENST00000563854 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 CD2BP2O95400 341 aaKnown RBP19.56■□□□□ 0.72
NME3-205ENST00000563854 CYP11B2P19099 503 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 ECM1Q16610 540 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 TPRNQ4KMQ1 711 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 SUSD6Q92537 303 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 RAB34Q9BZG1 259 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 S1PR5Q9H228 398 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 BHMT2Q9H2M3 363 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 TSHZ2Q9NRE2 1034 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 DDX19AQ9NUU7 478 aaKnown RBP19.56■□□□□ 0.72
NME3-205ENST00000563854 PRMT7Q9NVM4 692 aaPredicted RBP19.56■□□□□ 0.72
NME3-205ENST00000563854 KLK14Q9P0G3 267 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 KIAA1024Q9UPX6 916 aa19.56■□□□□ 0.72
NME3-205ENST00000563854 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 PRR33A8MZF0 331 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 H3BQV1 296 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 C2CD2LO14523 706 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 EPCAMP16422 314 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 HOXB8P17481 243 aaPredicted RBP19.55■□□□□ 0.72
NME3-205ENST00000563854 GJB2P29033 226 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 GIT2Q14161 759 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 PTPN14Q15678 1187 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 RARS2Q5T160 578 aaKnown RBP19.55■□□□□ 0.72
NME3-205ENST00000563854 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
NME3-205ENST00000563854 CES5AQ6NT32 575 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 KIFC3Q9BVG8 833 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 C2orf40Q9H1Z8 148 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 MIOSQ9NXC5 875 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 USP20Q9Y2K6 914 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 GIT1Q9Y2X7 761 aa19.55■□□□□ 0.72
NME3-205ENST00000563854 LOC730098B7Z3J9 87 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 PRKCBP05771 671 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 WEE2P0C1S8 567 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 PRPF4BQ13523 1007 aaKnown RBP19.54■□□□□ 0.72
NME3-205ENST00000563854 ZRSR1Q15695 479 aaKnown RBP19.54■□□□□ 0.72
NME3-205ENST00000563854 COLGALT2Q8IYK4 626 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 C12orf76Q8N812 135 aaPredicted RBP19.54■□□□□ 0.72
NME3-205ENST00000563854 IFT74Q96LB3 600 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 RPS6KC1Q96S38 1066 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 MARCH5Q9NX47 278 aa19.54■□□□□ 0.72
NME3-205ENST00000563854 A0A1B0GUA9 196 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 TTLL13PA6NNM8 815 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 F8W810 466 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 NR1I2O75469 434 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 URODP06132 367 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 MUTP22033 750 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 KLRC2P26717 231 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 CDC25AP30304 524 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 NAMPTP43490 491 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 PPP2R5AQ15172 486 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 MAPK6Q16659 721 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 HERC4Q5GLZ8 1057 aaPredicted RBP19.53■□□□□ 0.72
NME3-205ENST00000563854 KRT79Q5XKE5 535 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 KANK3Q6NY19 840 aa19.53■□□□□ 0.72
NME3-205ENST00000563854 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms