RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 NEK3P51956 506 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 WDR4P57081 412 aaKnown RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 TFAP4Q01664 338 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 TRIP13Q15645 432 aaPredicted RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 ZNF365Q70YC5 407 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 LCA5Q86VQ0 697 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 DNAJC19Q96DA6 116 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 NAALADL1Q9UQQ1 740 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 TTLL1O95922 423 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 LYNP07948 512 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 MAGEA10P43363 369 aaPredicted RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 INHBCP55103 352 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 PPATQ06203 517 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 SLC34A1Q06495 639 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 PPP1R21Q6ZMI0 780 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 PRUNE1Q86TP1 453 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 MTDHQ86UE4 582 aaKnown RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 BRIP1Q9BX63 1249 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 CADM1Q9BY67 442 aaKnown RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 DHX36Q9H2U1 1008 aaKnown RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 MAD2L2Q9UI95 211 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 ALG6Q9Y672 507 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 BCL9O00512 1426 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
SCAMP2-204ENST00000563829 SLC37A4O43826 429 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 PDE8AO60658 829 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 TMEM62Q0P6H9 643 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 GALNT17Q6IS24 598 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 DAGLBQ8NCG7 672 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 TUBGCP5Q96RT8 1024 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 UBN1Q9NPG3 1134 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 ETNK2Q9NVF9 386 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 TAS2R14Q9NYV8 317 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 ASIC3Q9UHC3 531 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 COG5Q9UP83 839 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 STARD13Q9Y3M8 1113 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 PASKQ96RG2 1323 aa13.21□□□□□ -0.29
SCAMP2-204ENST00000563829 MROH7Q68CQ1 1323 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 TDP2O95551 362 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 STAT1P42224 750 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 VPS41P49754 854 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 RTP1P59025 263 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 TMED2Q15363 201 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 HIC2Q96JB3 615 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 ZNF184Q99676 751 aaPredicted RBP13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 SUDS3Q9H7L9 328 aaPredicted RBP13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 AAASQ9NRG9 546 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 STX8Q9UNK0 236 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 WASF2Q9Y6W5 498 aa13.21□□□□□ -0.3
SCAMP2-204ENST00000563829 SYNGAP1Q96PV0 1343 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 MARCH6O60337 910 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 ECE2O60344 883 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 TOM1O60784 492 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 FGRP09769 529 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 GYG1P46976 350 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 DPY19L2P1Q6NXN4 242 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 MCUR1Q96AQ8 359 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 DCTN4Q9UJW0 460 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 NENFQ9UMX5 172 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 USP17L3A6NCW0 530 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 USP17L4A6NCW7 530 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 PSMG1O95456 288 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 COILP38432 576 aaPredicted RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 MARSP56192 900 aaKnown RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 MOGSQ13724 837 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 USP17L1Q7RTZ2 530 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 WDR60Q8WVS4 1066 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 AZIN2Q96A70 460 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 NPHS2Q9NP85 383 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 LNPEPQ9UIQ6 1025 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 ZNF232Q9UNY5 417 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 CAMTA1Q9Y6Y1 1673 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 PHRF1Q9P1Y6 1649 aaKnown RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 CFAP69A5D8W1 941 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 WTIPA6NIX2 430 aaPredicted RBP13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 E9PMD0 336 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 PDLIM1O00151 329 aa13.2□□□□□ -0.3
SCAMP2-204ENST00000563829 TTC4O95801 387 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms