RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TPH2Q8IWU9 490 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 ASAP3Q8TDY4 903 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 CPB2Q96IY4 423 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 FAM193BQ96PV7 902 aaPredicted RBP18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 NAP1L4Q99733 375 aaKnown RBP18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 EMILIN2Q9BXX0 1053 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 KANSL3Q9P2N6 904 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 PRG3Q9Y2Y8 225 aaPredicted RBP18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 ARL5CA6NH57 179 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 C2CD2LO14523 706 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 GALR2O43603 387 aaPredicted RBP18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 MARCH6O60337 910 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 SOD2P04179 222 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 ITGA4P13612 1032 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 DSC1Q08554 894 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 AMHR2Q16671 573 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 SLFN12Q8IYM2 578 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 RNF168Q8IYW5 571 aaPredicted RBP18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 PLCD3Q8N3E9 789 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 ATOH1Q92858 354 aaPredicted RBP18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 ZFP42Q96MM3 310 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 GAD1Q99259 594 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 HSD17B14Q9BPX1 270 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 EIF2AK1Q9BQI3 630 aaKnown RBP18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 HERC2P3Q9BVR0 1158 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 MRPL17Q9NRX2 175 aaKnown RBP18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 ZFHX2Q9C0A1 2572 aaPredicted RBP18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 C2orf16Q68DN1 1984 aa18.72■□□□□ 0.59
HDGFL3-203ENST00000563404 CFAP54Q96N23 3096 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 ERLIN2O94905 339 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 LARGE1O95461 756 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 MLH1P40692 756 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 SCNN1GP51170 649 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 AK2P54819 239 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 MBTD1Q05BQ5 628 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 CAPSQ13938 189 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 IFNLR1Q8IU57 520 aaPredicted RBP18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 NECAB1Q8N987 351 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 CNNM3Q8NE01 707 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 RPS6KC1Q96S38 1066 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 UBN1Q9NPG3 1134 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 STK39Q9UEW8 545 aa18.71■□□□□ 0.59
HDGFL3-203ENST00000563404 A0A087WWV3 80 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 TEX28O15482 410 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 N4BP1O75113 896 aaKnown RBP18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 LYPLA2O95372 231 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 BAG4O95429 457 aaKnown RBP18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 AXLP30530 894 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 KRT2P35908 639 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 ARL2P36404 184 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 OR1G1P47890 313 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 PLXNA3P51805 1871 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 NUBP1P53384 320 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 MXD4Q14582 209 aaPredicted RBP18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 KIAA0319Q5VV43 1072 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 NOTUMQ6P988 496 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 CCDC149Q6ZUS6 474 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 CSRNP2Q9H175 543 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 MAN1C1Q9NR34 630 aa18.7■□□□□ 0.58
HDGFL3-203ENST00000563404 INO80B-WBP1J3KQ70 363 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 B4GALT5O43286 388 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 GFRA3O60609 400 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 MYBP10242 640 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 ARF4P18085 180 aaPredicted RBP18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 GLRA2P23416 452 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 POU5F1BQ06416 359 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 PCBP1Q15365 356 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 ME3Q16798 604 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 CWF19L1Q69YN2 538 aaKnown RBP18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 ASTLQ6HA08 431 aaPredicted RBP18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 C15orf39Q6ZRI6 1047 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 GSTCDQ8NEC7 633 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 CCDC51Q96ER9 411 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 APOL6Q9BWW8 343 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 NXF3Q9H4D5 531 aaKnown RBP18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 ANKEF1Q9NU02 776 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 PCDHA12Q9UN75 941 aa18.69■□□□□ 0.58
HDGFL3-203ENST00000563404 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 BTBD18B2RXH4 712 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 ST18O60284 1047 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 URODP06132 367 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 NPR3P17342 541 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 RARRES1P49788 294 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 OTOP3Q7RTS5 596 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 CDR2LQ86X02 465 aaPredicted RBP18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 CMASQ8NFW8 434 aaPredicted RBP18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 PIGOQ8TEQ8 1089 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 WASF1Q92558 559 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 ACSF2Q96CM8 615 aaPredicted RBP18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 IRF2BPLQ9H1B7 796 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 TTC12Q9H892 705 aaPredicted RBP18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 KCNK12Q9HB15 430 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 RXFP1Q9HBX9 757 aa18.68■□□□□ 0.58
HDGFL3-203ENST00000563404 VPS13AQ96RL7 3174 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 CCDC195A0A1B0GUA6 201 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 RFPL2O75678 378 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 DGAT1O75907 488 aa18.67■□□□□ 0.58
HDGFL3-203ENST00000563404 AKAP5P24588 427 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms