RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CDC6Q99741 560 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 LGR4Q9BXB1 951 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 ZCWPW1Q9H0M4 648 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 MMRN2Q9H8L6 949 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 SLC52A2Q9HAB3 445 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 KRT84Q9NSB2 600 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 TBC1D14Q9P2M4 693 aa5.2□□□□□ -1.58
SMG1-207ENST00000563235 MAGED2Q9UNF1 606 aaPredicted RBP5.2□□□□□ -1.58
SMG1-207ENST00000563235 MRPL11Q9Y3B7 192 aaKnown RBP5.2□□□□□ -1.58
SMG1-207ENST00000563235 WDR19Q8NEZ3 1342 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ZNF142P52746 1687 aaPredicted RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 BIVM-ERCC5R4GMW8 1640 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 PI4KAP2A4QPH2 592 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 K7ESF4 209 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 DDX39AO00148 427 aaKnown RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 TULP2O00295 520 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 FSBPO95073 299 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 PLATP00750 562 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CELA3AP09093 270 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 TFE3P19532 575 aaPredicted RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 MTIF2P46199 727 aaKnown RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 ETV1P50549 477 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 GPC3P51654 580 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ITGA8P53708 1063 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 LSM11P83369 360 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMG1-207ENST00000563235 TRPC3Q13507 836 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CUL4AQ13619 759 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 SMAD2Q15796 467 aaKnown RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 ZYXQ15942 572 aaKnown RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 PRR16Q569H4 304 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ZMYM1Q5SVZ6 1142 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 OLFM4Q6UX06 510 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 B4GALNT4Q76KP1 1039 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 KRT74Q7RTS7 529 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CAND1Q86VP6 1230 aaKnown RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 LIX1LQ8IVB5 337 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 TMEM102Q8N9M5 508 aaPredicted RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 TOR1AIP2Q8NFQ8 470 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CREB3L4Q8TEY5 395 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 VPS50Q96JG6 964 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 EYA3Q99504 573 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 EHD1Q9H4M9 534 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 THAP9Q9H5L6 903 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMG1-207ENST00000563235 PRELID1Q9Y255 219 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 GNAT3A8MTJ3 354 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 BACH1O14867 736 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 IFNB1P01574 187 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 HEXBP07686 556 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 FGFR1P11362 822 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ALOX12P18054 663 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CPA2P48052 419 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CASP5P51878 434 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 DDR1Q08345 913 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 IQCB1Q15051 598 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 AARDQ4LEZ3 155 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 DCLRE1AQ6PJP8 1040 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 RFX8Q6ZV50 586 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CYP2U1Q7Z449 544 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 GRAMD1CQ8IYS0 662 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 AHI1Q8N157 1196 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 VWA5B2Q8N398 1253 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 TTLL11Q8NHH1 800 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 CASP10Q92851 521 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ZUFSPQ96AP4 578 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 NRBF2Q96F24 287 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 MAELQ96JY0 434 aaKnown RBP5.19□□□□□ -1.58
SMG1-207ENST00000563235 CCDC74BQ96LY2 380 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 PDE11AQ9HCR9 933 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ATP11BQ9Y2G3 1177 aa5.19□□□□□ -1.58
SMG1-207ENST00000563235 ALKQ9UM73 1620 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CDK12Q9NYV4 1490 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 ZNF804BA4D1E1 1349 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 SIGLEC1Q9BZZ2 1709 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 FHOD3Q2V2M9 1422 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CAMTA2O94983 1202 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 GNL1P36915 607 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 TFAP4Q01664 338 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ADCY2Q08462 1091 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 DMPKQ09013 629 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 MXD4Q14582 209 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 TIGD6Q17RP2 521 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 C15orf59Q2T9L4 293 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 SH2D4BQ5SQS7 431 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 ZCCHC12Q6PEW1 402 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CORO6Q6QEF8 472 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CHD1LQ86WJ1 897 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 KCNG4Q8TDN1 519 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 PTCD2Q8WV60 388 aaKnown RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 LRRC45Q96CN5 670 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 AHCYL2Q96HN2 611 aaKnown RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 LENG8Q96PV6 779 aaPredicted RBP5.18□□□□□ -1.58
SMG1-207ENST00000563235 FAM204AQ9H8W3 233 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 MALT1Q9UDY8 824 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 RASAL2Q9UJF2 1139 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 SNX8Q9Y5X2 465 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 TTC41PQ6P2S7 1318 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 A0A0B4J269 797 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 CAPN14A8MX76 684 aa5.18□□□□□ -1.58
SMG1-207ENST00000563235 POTECB2RU33 542 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms