RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 PMM2O15305 246 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 TEX33O43247 280 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 EXTL3O43909 919 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 LDHAP00338 332 aaKnown RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 EDN1P05305 212 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 NLRP11P59045 1033 aaKnown RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 POU5F1Q01860 360 aaKnown RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 UBXN1Q04323 297 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 MCL1Q07820 350 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 BFSP1Q12934 665 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 TBX2Q13207 712 aaPredicted RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 USP37Q86T82 979 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 RSPH3Q86UC2 560 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 GPD1LQ8N335 351 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 NLRP7Q8WX94 980 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 ARMC5Q96C12 935 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 TARS2Q9BW92 718 aaKnown RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 GCOM2Q9BZD3 368 aaPredicted RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 UNC93B1Q9H1C4 597 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 PTPRHQ9HD43 1115 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 OGDHLQ9ULD0 1010 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 TNFSF13BQ9Y275 285 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 A0A1W2PQ45 241 aaPredicted RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 A0A1W2PQY0 241 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 KBTBD13C9JR72 458 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 KRT13P13646 458 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 DARSP14868 501 aaKnown RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 CAPN2P17655 700 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 CTCFP49711 727 aaPredicted RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 ITGA7Q13683 1181 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 SNRNP35Q16560 246 aaKnown RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 GDF6Q6KF10 455 aaPredicted RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 TMC6Q7Z403 805 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 DRC7Q8IY82 874 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 MFSD14AQ96MC6 490 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 FAM49AQ9H0Q0 323 aaPredicted RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 AGO2Q9UKV8 859 aaKnown RBP15.19■□□□□ 0.02
CLK3-209ENST00000562670 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.024e-7■■■□□ 16.3
CLK3-209ENST00000562670 CEP350Q5VT06 3117 aa15.19■□□□□ 0.02
CLK3-209ENST00000562670 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
CLK3-209ENST00000562670 P4HA2O15460 535 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 CLDN3O15551 220 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 FAM189A1O60320 539 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 N4BP1O75113 896 aaKnown RBP15.18■□□□□ 0.02
CLK3-209ENST00000562670 CCL5P13501 91 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 AXLP30530 894 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 CRYBB1P53674 252 aaPredicted RBP15.18■□□□□ 0.02
CLK3-209ENST00000562670 CHMP4BP1P59074 171 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 PTK7Q13308 1070 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 NOLC1Q14978 699 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLK3-209ENST00000562670 KYAT1Q16773 422 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 CCDC150Q8NCX0 1101 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 DNAJB3Q8WWF6 145 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 ZNF333Q96JL9 665 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 SCLT1Q96NL6 688 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 SIK3Q9Y2K2 1263 aa15.18■□□□□ 0.02
CLK3-209ENST00000562670 ZNF233A6NK53 670 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 OGTO15294 1046 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 STX10O60499 249 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 TSPAN1O60635 241 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 ERLIN2O94905 339 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 ADRB2P07550 413 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 MCF2P10911 925 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 SFPQP23246 707 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLK3-209ENST00000562670 EIF4BP23588 611 aaKnown RBP15.17■□□□□ 0.02
CLK3-209ENST00000562670 GTF2H1P32780 548 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 CLDN10P78369 228 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 MRPS6P82932 125 aaKnown RBP15.17■□□□□ 0.02
CLK3-209ENST00000562670 ZNF200P98182 395 aaPredicted RBP15.17■□□□□ 0.02
CLK3-209ENST00000562670 CYP24A1Q07973 514 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 SNX17Q15036 470 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 KIZQ2M2Z5 673 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 APBB1IPQ7Z5R6 666 aaPredicted RBP15.17■□□□□ 0.02
CLK3-209ENST00000562670 CBWD2Q8IUF1 395 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 CREBRFQ8IUR6 639 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 SPC24Q8NBT2 197 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 CCDC51Q96ER9 411 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 MSTO1Q9BUK6 570 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 NUP58Q9BVL2 599 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 HAPLN2Q9GZV7 340 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 CRISPLD2Q9H0B8 497 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 PCIF1Q9H4Z3 704 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 ANKFY1Q9P2R3 1169 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 DAAM1Q9Y4D1 1078 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 TRPV2Q9Y5S1 764 aa15.17■□□□□ 0.02
CLK3-209ENST00000562670 CENPFP49454 3210 aa15.16■□□□□ 0.02
CLK3-209ENST00000562670 A0A1B0GUA9 196 aa15.16■□□□□ 0.02
CLK3-209ENST00000562670 A0A1W2PQJ5 194 aa15.16■□□□□ 0.02
CLK3-209ENST00000562670 TTLL13PA6NNM8 815 aa15.16■□□□□ 0.02
CLK3-209ENST00000562670 M0QZ92 97 aa15.16■□□□□ 0.02
CLK3-209ENST00000562670 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms